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Geometric confinements are frequently encountered in soft matter systems and in particular significantly alter the dynamics of swimming microorganisms in viscous media. Surface-related effects on the motility of microswimmers can lead to…

In this fluid dynamics video, we demonstrate the microscale mixing enhancement of passive tracer particles in suspensions of swimming microalgae, Chlamydomonas reinhardtii. These biflagellated, single-celled eukaryotes (10 micron diameter)…

Microorganisms and synthetic microswimmers often encounter complex environments consisting of networks of obstacles embedded into viscous fluids. Such settings include biological media, such as mucus with filamentous networks, as well as…

Many swimming bacteria naturally inhabit confined environments, yet how confinement influences their swimming behaviors remains unclear. Here, we combine experiments, continuum modeling and particle-based simulations to investigate…

Biological Physics · Physics 2025-10-13 Da Wei , Shiyuan Hu , Tangmiao Tang , Yaochen Yang , Fanlong Meng , Yi Peng

During metastatic dissemination, streams of cells collectively migrate through a network of narrow channels within the extracellular matrix, before entering into the blood stream. This strategy is believed to outperform other migration…

Soft Condensed Matter · Physics 2020-10-30 V. Yashunsky , D. J. G. Pearce , C. Blanch-Mercader , F. Ascione , L. Giomi , P. Silberzan

Microorganisms, such as bacteria and microalgae, often live in habitats consisting of a liquid phase and a plethora of interfaces. The precise ways in which these motile microbes behave in their confined environment remain unclear. Using…

Bacterial swimming is well characterized in uniform liquids at rest. The natural habitat of bacterial swimmers, however, is often dominated by moving fluids and interfaces, resulting in shear flows that may strongly alter bacterial…

Brownian motion is essential for describing diffusion in systems ranging from simple to complex liquids. Unlike simple liquids, which consist of only a solvent, complex liquids, such as colloidal suspensions or the cytoplasm of a cell, are…

Soft Condensed Matter · Physics 2025-02-27 Jeffrey C. Everts , Robert Hołyst , Karol Makuch

Bacteria commonly live in structured communities that affect human health and influence ecological systems. Heterogeneous populations, such as motile and non-motile populations, often coexist in bacteria communities. Motile subpopulations…

Biological Physics · Physics 2019-06-19 Haoran Xu , Justas Dauparas , Debasish Das , Eric Lauga , Yilin Wu

The effect of crowding on the run-and-tumble dynamics of swimmers such as bacteria is studied using a discrete lattice model of mutually excluding particles that move with constant velocity along a direction that is randomized at a rate…

Soft Condensed Matter · Physics 2015-06-16 Rodrigo Soto , Ramin Golestanian

Microswimmers are encountered in a wide variety of biophysical settings. When interacting with flow fields, they show interesting dynamical features such as trapping, clustering, and preferential orientation. One important step towards the…

Fluid Dynamics · Physics 2020-10-02 José-Agustín Arguedas-Leiva , Michael Wilczek

The hydrodynamic stresses created by active particles can destabilise orientational order present in the system. This is manifested, for example, by the appearance of a bend instability in active nematics or in quasi-2-dimensional living…

Soft Condensed Matter · Physics 2024-06-05 Bhavesh Gautam , Juho Lintuvuori

Malaria is transmitted to vertebrates via a mosquito bite, during which rod-like and crescent-shaped parasites, called sporozoites, are injected into the skin of the host. Searching for a blood capillary to penetrate, sporozoites move…

Cell Behavior · Quantitative Biology 2014-10-24 Anna Battista , Friedrich Frischknecht , Ulrich S. Schwarz

Ciliated microorganisms near the base of the aquatic food chain either swim to encounter prey or attach at a substrate and generate feeding currents to capture passing particles. Here, we represent attached and swimming ciliates using a…

Fluid Dynamics · Physics 2024-04-23 Jingyi Liu , Yi Man , John H. Costello , Eva Kanso

Slicks are thin viscous films that can be found at the air--water interface of water bodies such as lakes, rivers and oceans. These micro-layers are enriched in surfactants, organic matter, and microorganisms, and exhibit steep physical and…

Fluid Dynamics · Physics 2025-10-30 Felipe A. Barros , Italo Salas , Enkeleida Lushi , Francisca Guzman-Lastra

We analyze the dynamics of a tracer particle embedded in a bath of hard spheres confined in a channel of varying section. By means of Brownian dynamics simulations we apply a constant force on the tracer particle and discuss the dependence…

Soft Condensed Matter · Physics 2018-11-14 Antonio M. Puertas , Paolo Malgaretti , Ignacio Pagonabarraga

Active matter comprised of self-propelled interacting units holds a major promise for extraction of useful work from its seemingly chaotic out-of-equilibrium dynamics. Streamlining active matter to produce work is especially important at…

Soft Condensed Matter · Physics 2021-03-17 Mojtaba Rajabi , Hend Baza , Taras Turiv , Oleg D. Lavrentovich

In this letter we propose a kinematic model to show how collisions with a surface and rotational Brownian motion give rise to the accumulation of micro-swimmers near a surface. In this model, an elongated microswimmer invariably travels…

Biological Physics · Physics 2008-12-23 Guanglai Li , Jay X. Tang

We study numerically how multiple deformable capsules squeeze into a constriction. This situation is largely encountered in microfluidic chips designed to manipulate living cells, which are soft entities. We use fully three-dimensional…

Soft Condensed Matter · Physics 2021-12-15 Clément Bielinski , Othmane Aouane , Jens Harting , Badr Kaoui

Micron-sized self-propelled (active) particles can be considered as model systems for characterizing more complex biological organisms like swimming bacteria or motile cells. We produce asymmetric microswimmers by soft lithography and study…