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The use of Bayesian adaptive designs for randomised controlled trials has been hindered by the lack of software readily available to statisticians. We have developed a new software package (Bayesian Adaptive Trials Simulator Software -…

This paper describes and illustrates the functionality of the baker R package. The package estimates a suite of nested partially-latent class models (NPLCM) for multivariate binary responses that are observed under a case-control design.…

Methodology · Statistics 2022-02-25 Irena B Chen , Qiyuan Shi , Scott L Zeger , Zhenke Wu

We present StructuralDecompose, an R package for modular and interpretable time series decomposition. Unlike existing approaches that treat decomposition as a monolithic process, StructuralDecompose separates the analysis into distinct…

Machine Learning · Computer Science 2025-10-07 Allen Daniel Sunny

R is a language and environment for statistical computing and graphics, which provides a wide variety of statistical tools (modeling, statistical testing, time series analysis, classification problems, machine learning, ...), together with…

Other Statistics · Statistics 2023-06-22 M. Isabel Parra , Eva L. Sanjuán , M. Carmen Robustillo , Mario M. Pizarro

Cox analysis is a common clinical data analysis technique to link valuable variables to clinical outcomes including dead and relapse. In the omics era, Cox model batch processing is a basic strategy for screening clinically relevant…

Quantitative Methods · Quantitative Biology 2021-10-28 Shixiang Wang , Xue-Song Liu , Jianfeng Li , Qi Zhao

We describe the R package acebayes and demonstrate its use to find Bayesian optimal experimental designs. A decision-theoretic approach is adopted, with the optimal design maximising an expected utility. Finding Bayesian optimal designs for…

Computation · Statistics 2018-12-27 Antony Overstall , David Woods , Maria Adamou

We introduce BayesChange, a computationally efficient R package, built on C++, for Bayesian change point detection and clustering of observations sharing common change points. While many R packages exist for change point analysis,…

Computation · Statistics 2025-11-10 Luca Danese , Riccardo Corradin , Andrea Ongaro

There are many forecasting related packages in R with varied popularity, the most famous of all being \texttt{forecast}, which implements several important forecasting approaches, such as ARIMA, ETS, TBATS and others. However, the main…

Methodology · Statistics 2023-01-06 Ivan Svetunkov

The R package, Libra, stands for the LInearized BRegman Al- gorithm in high dimensional statistics. The Linearized Bregman Algorithm is a simple iterative procedure to generate sparse regularization paths of model estimation, which are…

Applications · Statistics 2016-04-21 Jiechao Xiong , Feng Ruan , Yuan Yao

Cohomologies of nonassociative metagroup algebras are investigated. Extensions of metagroup algebras are studied. Examples are given.

Algebraic Topology · Mathematics 2017-06-30 Sergey V. Ludkowski

We introduce the new sage_acsv package for the SageMath computer algebra system, allowing users to rigorously compute asymptotics for a large variety of multivariate sequences with rational generating functions. Using Sage's support for…

Combinatorics · Mathematics 2023-09-04 Benjamin Hackl , Andrew Luo , Stephen Melczer , Jesse Selover , Elaine Wong

Due to their flexibility and superior performance, machine learning models frequently complement and outperform traditional statistical survival models. However, their widespread adoption is hindered by a lack of user-friendly tools to…

Conducting research often involves managing multiple disconnected tools for survey design, data collection, response analysis, and report generation, leading to inefficiencies, increased error risks, and challenges in ensuring…

Computation · Statistics 2025-08-11 Clievins Selva

We introduce the notion of weakly associative algebra and its relations with the notion of nonassociative Poisson algebras.

Rings and Algebras · Mathematics 2020-05-27 Elisabeth Remm

CVXR is an R package that provides an object-oriented modeling language for convex optimization, similar to CVX, CVXPY, YALMIP, and Convex.jl. It allows the user to formulate convex optimization problems in a natural mathematical syntax…

Computation · Statistics 2021-01-01 Anqi Fu , Balasubramanian Narasimhan , Stephen Boyd

We introduce c-lasso, a Python package that enables sparse and robust linear regression and classification with linear equality constraints. The underlying statistical forward model is assumed to be of the following form: \[ y = X \beta +…

Computation · Statistics 2020-11-03 Léo Simpson , Patrick L. Combettes , Christian L. Müller

This paper introduces an imperative process algebra based on ACP (Algebra of Communicating Processes). Like other imperative process algebras, this process algebra deals with processes of the kind that arises from the execution of…

Logic in Computer Science · Computer Science 2022-07-08 C. A. Middelburg

ASTRA is a Python package that provides a modular, instrument-independent interface for working with high-resolution stellar spectra. Designed to support data from multiple spectrographs, including ESPRESSO (Pepe et al., 2021), HARPS (Mayor…

Instrumentation and Methods for Astrophysics · Physics 2026-01-16 André M. Silva , J. P. Faria , N. C. Santos , S. G. Sousa , P. T. P. Viana , J. H. C. Martins

SDRcausal is a package that implements sufficient dimension reduction methods for causal inference as proposed in Ghosh, Ma, and de Luna (2021). The package implements (augmented) inverse probability weighting and outcome regression…

Computation · Statistics 2021-05-07 Mohammad Ghasempour , Xavier de Luna

We present a new package for Mathematica system, called Libra. Its purpose is to provide convenient tools for the transformation of the first-order differential systems $\partial_i \boldsymbol j = M_i \boldsymbol j$ for one or several…

High Energy Physics - Phenomenology · Physics 2021-07-07 Roman N. Lee