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Motif discovery in DNA sequences is a challenging task in molecular biology. In computational motif discovery, Planted (l, d) motif finding is a widely studied problem and numerous algorithms are available to solve it. Both hardware and…

Computational Engineering, Finance, and Science · Computer Science 2014-03-07 P. Perera , R. G. Ragel

For years, SIMD/vector units have enhanced the capabilities of modern CPUs in High-Performance Computing (HPC) and mobile technology. Typical commercially-available SIMD units process up to 8 double-precision elements with one instruction.…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-14 Pablo Vizcaino , Georgios Ieronymakis , Nikolaos Dimou , Vassilis Papaefstathiou , Jesus Labarta , Filippo Mantovani

Optimizing scientific applications to take full advan-tage of modern memory subsystems is a continual challenge forapplication and compiler developers. Factors beyond working setsize affect performance. A benchmark framework that…

Performance · Computer Science 2018-12-20 Mahesh Lakshminarasimhan , Catherine Olschanowsky

The aim of parallel computing is to increase an application performance by executing the application on multiple processors. OpenMP is an API that supports multi platform shared memory programming model and shared-memory programs are…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-11-12 Vibha Rajput , Alok Katiyar

Deep learning implementations on CPUs (Central Processing Units) are gaining more traction. Enhanced AI capabilities on commodity x86 architectures are commercially appealing due to the reuse of existing hardware and virtualization ease. A…

Machine Learning · Computer Science 2021-03-22 Shabnam Daghaghi , Nicholas Meisburger , Mengnan Zhao , Yong Wu , Sameh Gobriel , Charlie Tai , Anshumali Shrivastava

Modern high-performance architectures employ large last-level caches (LLCs). While large LLCs can reduce average memory access latency for workloads with a high degree of locality, they can also increase latency for workloads with irregular…

Hardware Architecture · Computer Science 2025-11-26 Hoa Nguyen , Pongstorn Maidee , Jason Lowe-Power , Alireza Kaviani

The increasing complexity of transformer models in artificial intelligence expands their computational costs, memory usage, and energy consumption. Hardware acceleration tackles the ensuing challenges by designing processors and…

Hardware Architecture · Computer Science 2023-12-21 Alireza Amirshahi , Giovanni Ansaloni , David Atienza

Efficiency in instruction fetching is critical to performance, and this requires the primary structures--L1 instruction caches (L1i), branch target buffers (BTB) and instruction TLBs (iTLB)--to have the requisite information when needed.…

Hardware Architecture · Computer Science 2026-04-02 Shyam Murthy , Gurindar S. Sohi

As computing demand and memory footprint of deep learning applications accelerate, clusters of cores sharing local (L1) multi-banked memory are widely used as key building blocks in large-scale architectures. When the cluster's core count…

Hardware Architecture · Computer Science 2025-01-27 Diyou Shen , Yichao Zhang , Marco Bertuletti , Luca Benini

This work focuses on accelerating the multiplication of a dense random matrix with a (fixed) sparse matrix, which is frequently used in sketching algorithms. We develop a novel scheme that takes advantage of blocking and recomputation…

Computational Engineering, Finance, and Science · Computer Science 2024-05-14 Tianyu Liang , Riley Murray , Aydın Buluç , James Demmel

As the size of artificial intelligence and machine learning (AI/ML) models and datasets grows, the memory bandwidth becomes a critical bottleneck. The paper presents a novel extended memory hierarchy that addresses some major memory…

Hardware Architecture · Computer Science 2025-05-20 Jordi Altayo , Paul Delestrac , David Novo , Simey Yang , Debjyoti Bhattacharjee , Francky Catthoor

The explosion in workload complexity and the recent slow-down in Moore's law scaling call for new approaches towards efficient computing. Researchers are now beginning to use recent advances in machine learning in software optimizations,…

The emergence of a new, open, and free instruction set architecture, RISC-V, has heralded a new era in microprocessor architectures. Starting with low-power, low-performance prototypes, the RISC-V community has a good chance of moving…

Performance · Computer Science 2023-09-06 Valentin Volokitin , Evgeny Kozinov , Valentina Kustikova , Alexey Liniov , Iosif Meyerov

Machine learning algorithms have shown potential to improve prefetching performance by accurately predicting future memory accesses. Existing approaches are based on the modeling of text prediction, considering prefetching as a…

Hardware Architecture · Computer Science 2022-05-06 Pengmiao Zhang , Ajitesh Srivastava , Anant V. Nori , Rajgopal Kannan , Viktor K. Prasanna

Convolution is a fundamental operation in many applications, such as computer vision, natural language processing, image processing, etc. Recent successes of convolutional neural networks in various deep learning applications put even…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-05-31 Xiaoming Chen , Jianxu Chen , Danny Z. Chen , Xiaobo Sharon Hu

New algorithms and optimization techniques are needed to balance the accelerating trend towards bandwidth-starved multicore chips. It is well known that the performance of stencil codes can be improved by temporal blocking, lessening the…

Performance · Computer Science 2012-03-01 Markus Wittmann , Georg Hager , Gerhard Wellein

Optimizing the performance of stencil algorithms has been the subject of intense research over the last two decades. Since many stencil schemes have low arithmetic intensity, most optimizations focus on increasing the temporal data access…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-10-19 Tareq Malas , Georg Hager , Hatem Ltaief , David Keyes

Huge amount of data in the form of strings are being handled in bio-computing applications and searching algorithms are quite frequently used in them. Many methods utilizing on both software and hardware are being proposed to accelerate…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-03-31 D. Herath , C. Lakmali , R. G. Ragel

High main memory latency continues to limit performance of modern high-performance out-of-order cores. While DRAM latency has remained nearly the same over many generations, DRAM bandwidth has grown significantly due to higher frequencies,…

Hardware Architecture · Computer Science 2019-10-09 Rahul Bera , Anant V. Nori , Onur Mutlu , Sreenivas Subramoney

Indirect memory accesses frequently appear in applications where memory bandwidth is a critical bottleneck. Prior indirect memory access proposals, such as indirect prefetchers, runahead execution, fetchers, and decoupled access/execute…