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The yaglm package aims to make the broader ecosystem of modern generalized linear models accessible to data analysts and researchers. This ecosystem encompasses a range of loss functions (e.g. linear, logistic, quantile regression),…

Computation · Statistics 2021-10-13 Iain Carmichael , Thomas Keefe , Naomi Giertych , Jonathan P Williams

This paper describes a deep-SDM framework, MALPOLON. Written in Python and built upon the PyTorch library, this framework aims to facilitate training and inferences of deep species distribution models (deep-SDM) and sharing for users with…

Machine Learning · Computer Science 2024-09-27 Theo Larcher , Lukas Picek , Benjamin Deneu , Titouan Lorieul , Maximilien Servajean , Alexis Joly

Effective code generation with language models hinges on two critical factors: accurately understanding the intent of the prompt and generating code that applies algorithmic reasoning to produce correct solutions capable of passing diverse…

Artificial Intelligence · Computer Science 2025-10-21 Amir Jalilifard , Anderson de Rezende Rocha , Marcos Medeiros Raimundo

A wide range of symbolic analysis and optimization problems can be formalized using polyhedra. Sub-classes of polyhedra, also known as sub-polyhedral domains, are sought for their lower space and time complexity. We introduce the Strided…

Symbolic Computation · Computer Science 2024-07-08 Arjun Pitchanathan , Albert Cohen , Oleksandr Zinenko , Tobias Grosser

Domain-specific languages (DSLs) are touted as both easy to embed in programs and easy to optimize. Yet these goals are often in tension. Embedded or internal DSLs fit naturally with a host language, while inheriting the host's performance…

Programming Languages · Computer Science 2021-07-16 Rajan Walia , Chung-chieh Shan , Sam Tobin-Hochstadt

Large language models (LLMs) have recently shown strong reasoning capabilities beyond traditional language tasks, motivating their use for numerical optimization. This paper presents LLMize, an open-source Python framework that enables…

Machine Learning · Computer Science 2026-01-06 M. Rizki Oktavian

We present a novel framework that integrates Large Language Models (LLMs) with automated planning and formal verification to streamline the creation and use of Markov Decision Processes (MDP). Our system leverages LLMs to extract structured…

Robotics · Computer Science 2026-01-12 Enrico Saccon , Davide De Martini , Matteo Saveriano , Edoardo Lamon , Luigi Palopoli , Marco Roveri

Approximate matching (AM) is a concept in digital forensics to determine the similarity between digital artifacts. An important use case of AM is the reliable and efficient detection of case-relevant data structures on a blacklist, if only…

Cryptography and Security · Computer Science 2023-04-28 Frieder Uhlig , Lukas Struppek , Dominik Hintersdorf , Thomas Göbel , Harald Baier , Kristian Kersting

Deep neural-network-based language models (LMs) are increasingly applied to large-scale protein sequence data to predict protein function. However, being largely black-box models and thus challenging to interpret, current protein LM…

Quantitative Methods · Quantitative Biology 2024-08-06 Mai Ha Vu , Rahmad Akbar , Philippe A. Robert , Bartlomiej Swiatczak , Victor Greiff , Geir Kjetil Sandve , Dag Trygve Truslew Haug

Graph algorithms are at the heart of several applications, and achieving high performance with them has become critical due to the tremendous growth of irregular data. However, irregular algorithms are quite challenging to parallelize…

Programming Languages · Computer Science 2019-03-06 Bikash Gogoi , Unnikrishnan Cheramangalath , Rupesh Nasre

Contemporary database systems, while effective, suffer severe issues related to complexity and usability, especially among individuals who lack technical expertise but are unfamiliar with query languages like Structured Query Language…

Databases · Computer Science 2025-07-25 M. Tedeschi , S. Rizwan , C. Shringi , V. Devram Chandgir , S. Belich

Protein language models (PLMs) have shown promise in improving the understanding of protein sequences, contributing to advances in areas such as function prediction and protein engineering. However, training these models from scratch…

Machine Learning · Computer Science 2024-12-19 Shivasankaran Vanaja Pandi , Bharath Ramsundar

Domain-Specific Languages (DSLs) improve programmers productivity by decoupling problem descriptions from algorithmic implementations. However, DSLs for High-Performance Computing (HPC) have two additional critical requirements: performance…

Mathematical Software · Computer Science 2022-04-28 Sandra Macià , Pedro J. Martıínez-Ferrer , Eduard Ayguadé , Vicenç Beltran

DNA sequences encode critical genetic information, yet their variable length and discrete nature impede direct utilization in deep learning models. Existing DNA representation schemes convert sequences into numerical vectors but fail to…

Genomics · Quantitative Biology 2025-12-16 Zhiyuan Peng , Naifan Zhang , Yuanbo Tang , Yang Li

This paper takes an exploratory approach to examine the use of ChatGPT for pattern mining. It proposes an eight-step collaborative process that combines human insight with AI capabilities to extract patterns from known uses. The paper…

Artificial Intelligence · Computer Science 2024-12-24 Michael Weiss

Model-driven software development is a promising way to cope with the complexity of system integration in advanced robotics, as it already demonstrated its benefits in domains with comparably challenging system integration requirements.…

Robotics · Computer Science 2013-02-27 Arne Nordmann , Sebastian Wrede

Large pretrained language models (PLMs) are often domain- or task-adapted via fine-tuning or prompting. Finetuning requires modifying all of the parameters and having enough data to avoid overfitting while prompting requires no training and…

Computation and Language · Computer Science 2022-07-11 Zejiang Hou , Julian Salazar , George Polovets

Recent Language Models (LMs) achieve breakthrough performance in code generation when trained on human-authored problems, even solving some competitive-programming problems. Self-play has proven useful in games such as Go, and thus it is…

Machine Learning · Computer Science 2023-04-13 Patrick Haluptzok , Matthew Bowers , Adam Tauman Kalai

We devise an algorithm to generate propositions that objectively instantiate graphs supporting coherence-driven inference. We also benchmark the ability of large language models (LLMs) to reconstruct coherence graphs from (a simple…

Artificial Intelligence · Computer Science 2025-08-21 Steve Huntsman , Jewell Thomas

The transformative influence of Large Language Models (LLMs) is profoundly reshaping the Artificial Intelligence (AI) technology domain. Notably, ChatGPT distinguishes itself within these models, demonstrating remarkable performance in…

Software Engineering · Computer Science 2024-05-28 Sayed Erfan Arefin , Tasnia Ashrafi Heya , Hasan Al-Qudah , Ynes Ineza , Abdul Serwadda
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