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Graph Neural Network (GNN) is an emerging technique for graph-based learning tasks such as node classification. In this work, we reveal the vulnerability of GNN to the imbalance of node labels. Traditional solutions for imbalanced…

Machine Learning · Computer Science 2022-02-08 Xiaohe Li , Lijie Wen , Yawen Deng , Fuli Feng , Xuming Hu , Lei Wang , Zide Fan

Class imbalance is pervasive in real-world graph datasets, where the majority of annotated nodes belong to a small set of classes (majority classes), leaving many other classes (minority classes) with only a handful of labeled nodes. Graph…

Machine Learning · Computer Science 2024-12-31 Abdullah Alchihabi , Hao Yan , Yuhong Guo

One main challenge in imbalanced graph classification is to learn expressive representations of the graphs in under-represented (minority) classes. Existing generic imbalanced learning methods, such as oversampling and imbalanced learning…

Machine Learning · Computer Science 2024-05-20 Rongrong Ma , Guansong Pang , Ling Chen

Graph Neural Networks (GNNs) have achieved unprecedented success in identifying categorical labels of graphs. However, most existing graph classification problems with GNNs follow the protocol of balanced data splitting, which misaligns…

Machine Learning · Computer Science 2022-09-29 Yu Wang , Yuying Zhao , Neil Shah , Tyler Derr

Graph neural networks (GNNs) have shown promise in addressing graph-related problems, including node classification. However, conventional GNNs assume an even distribution of data across classes, which is often not the case in real-world…

Machine Learning · Computer Science 2023-10-16 Zirui Liang , Yuntao Li , Tianjin Huang , Akrati Saxena , Yulong Pei , Mykola Pechenizkiy

Recent years have witnessed great success in handling node classification tasks with Graph Neural Networks (GNNs). However, most existing GNNs are based on the assumption that node samples for different classes are balanced, while for many…

Machine Learning · Computer Science 2021-06-22 Lirong Wu , Haitao Lin , Zhangyang Gao , Cheng Tan , Stan. Z. Li

Imbalanced node classification is a critical challenge in graph learning, where most existing methods typically utilize Graph Neural Networks (GNNs) to learn node representations. These methods can be broadly categorized into the data-level…

Machine Learning · Computer Science 2025-11-14 Chaofan Zhu , Xiaobing Rui , Zhixiao Wang

Graph Neural Networks (GNNs) have achieved promising performance in semi-supervised node classification in recent years. However, the problem of insufficient supervision, together with representation collapse, largely limits the performance…

Machine Learning · Computer Science 2025-03-07 Xihong Yang , Yiqi Wang , Yue Liu , Yi Wen , Lingyuan Meng , Sihang Zhou , Xinwang Liu , En Zhu

Imbalanced node classification is a critical challenge in graph learning, where most existing methods typically utilize Graph Neural Networks (GNNs) to learn node representations. These methods can be broadly categorized into the data-level…

Machine Learning · Computer Science 2026-01-28 Zhixiao Wang , Chaofan Zhu , Qihan Feng , Jian Zhang , Xiaobin Rui , Philip S Yu

Classifying nodes in a graph is a common problem. The ideal classifier must adapt to any imbalances in the class distribution. It must also use information in the clustering structure of real-world graphs. Existing Graph Neural Networks…

Graph neural networks (GNNs) often struggle in class-imbalanced settings, where minority classes are under-represented and predictions are biased toward majorities. We propose \textbf{PIMPC-GNN}, a physics-informed multi-phase consensus…

Machine Learning · Computer Science 2026-02-03 Abdul Joseph Fofanah , Lian Wen , David Chen

Recently, some contrastive learning methods have been proposed to simultaneously learn representations and clustering assignments, achieving significant improvements. However, these methods do not take the category information and…

Computer Vision and Pattern Recognition · Computer Science 2021-04-06 Huasong Zhong , Jianlong Wu , Chong Chen , Jianqiang Huang , Minghua Deng , Liqiang Nie , Zhouchen Lin , Xian-Sheng Hua

In recent years, graph neural networks (GNNs) have achieved state-of-the-art performance for node classification. However, most existing GNNs would suffer from the graph imbalance problem. In many real-world scenarios, node classes are…

Machine Learning · Computer Science 2022-06-14 Tianxiang Zhao , Xiang Zhang , Suhang Wang

Unsupervised graph representation learning aims to learn low-dimensional node embeddings without supervision while preserving graph topological structures and node attributive features. Previous graph neural networks (GNN) require a large…

Machine Learning · Computer Science 2020-09-04 Yanqiao Zhu , Yichen Xu , Feng Yu , Shu Wu , Liang Wang

This paper studies the problem of graph-level clustering, which is a novel yet challenging task. This problem is critical in a variety of real-world applications such as protein clustering and genome analysis in bioinformatics. Recent years…

Machine Learning · Computer Science 2023-03-09 Wei Ju , Yiyang Gu , Binqi Chen , Gongbo Sun , Yifang Qin , Xingyuming Liu , Xiao Luo , Ming Zhang

Imbalanced classification on graphs is ubiquitous yet challenging in many real-world applications, such as fraudulent node detection. Recently, graph neural networks (GNNs) have shown promising performance on many network analysis tasks.…

Machine Learning · Computer Science 2021-06-08 Liang Qu , Huaisheng Zhu , Ruiqi Zheng , Yuhui Shi , Hongzhi Yin

Graph clustering, a classical task in graph learning, involves partitioning the nodes of a graph into distinct clusters. This task has applications in various real-world scenarios, such as anomaly detection, social network analysis, and…

Machine Learning · Computer Science 2024-08-09 Xiaoyang Ji , Yuchen Zhou , Haofu Yang , Shiyue Xu , Jiahao Li

The class imbalance problem refers to the disproportionate distribution of samples across different classes within a dataset, where the minority classes are significantly underrepresented. This issue is also prevalent in graph-structured…

Machine Learning · Computer Science 2025-09-30 Fanlong Zeng , Wensheng Gan , Philip S. Yu

Graph clustering is essential in graph analysis for revealing structural patterns and node communities. Despite recent advances in self-supervised contrastive learning that have improved clustering via structural and attribute signals,…

Machine Learning · Computer Science 2026-05-28 Lei Zhang , Fubo Sun , Haipeng Yang , Zhong Guan , Likang Wu

Imbalanced node classification in graph neural networks (GNNs) happens when some labels are much more common than others, which causes the model to learn unfairly and perform badly on the less common classes. To solve this problem, we…

Machine Learning · Computer Science 2026-02-04 Abdul Joseph Fofanah , Lian Wen , David Chen , Shaoyang Zhang
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