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We propose ReMiDi, a novel method for inferring neuronal microstructure as arbitrary 3D meshes using a differentiable diffusion Magnetic Resonance Imaging (dMRI) simulator. We first implemented in PyTorch a differentiable dMRI simulator…

Image and Video Processing · Electrical Eng. & Systems 2025-03-03 Prathamesh Pradeep Khole , Zahra Kais Petiwala , Shri Prathaa Magesh , Ehsan Mirafzali , Utkarsh Gupta , Jing-Rebecca Li , Andrada Ianus , Razvan Marinescu

The conventional approach to nanophotonic metasurface design and optimization for a targeted electromagnetic response involves exploring large geometry and material spaces, which is computationally costly, time consuming and a highly…

Optics · Physics 2020-05-27 Abhishek Mall , Abhijeet Patil , Amit Sethi , Anshuman Kumar

Soft materials such as rubbers, hydrogels, and biological tissues undergo damage in the form of stiffness degradation without apparent changes in their stress-free geometry. Accurate simulation of this behavior is critical in applications…

Computational Engineering, Finance, and Science · Computer Science 2026-04-07 Mark Wilkinson , Amirhossein Amiri-Hezaveh , Adrian Buganza Tepole

This paper presents the generalized formulations of fundamental schemes for efficient unconditionally stable implicit finite-difference time-domain (FDTD) methods. The fundamental schemes constitute a family of implicit schemes that feature…

Numerical Analysis · Mathematics 2020-12-01 Eng Leong Tan

We present an elastic simulator for domains defined as evolving implicit functions, which is efficient, robust, and differentiable with respect to both shape and material. This simulator is motivated by applications in 3D reconstruction: it…

Graphics · Computer Science 2025-04-09 Gilles Daviet , Tianchang Shen , Nicholas Sharp , David I. W. Levin

Deep functional maps, leveraging learned feature extractors and spectral correspondence solvers, are fundamental to non-rigid 3D shape matching. Based on an analysis of open-source implementations, we find that standard functional map…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Yizheng Xie , Lennart Bastian , Congyue Deng , Thomas W. Mitchel , Maolin Gao , Daniel Cremers

Inverse design enables automating the discovery and optimization of devices achieving performance significantly exceeding that of traditional human-engineered designs. However, existing methodologies to inverse-design electromagnetic…

Computational Physics · Physics 2026-01-30 Jui-Hung Sun , Mohamed Elsawaf , Yifei Zheng , Ho-Chun Lin , Chia Wei Hsu , Constantine Sideris

We study an inverse design problem for the linear multiple fragmentation equation arising in particle dynamics. Our objective is to reconstruct an unknown initial size distribution that evolves, under a prescribed fragmentation law, into a…

Optimization and Control · Mathematics 2026-02-20 Arijit Das

The state-of-the-art dimensionality reduction approaches largely rely on complicated optimization procedures. On the other hand, closed-form approaches requiring merely eigen-decomposition do not have enough sophistication and nonlinearity.…

Machine Learning · Computer Science 2023-08-14 Chengrui Li , Anqi Wu

Numerical optimization for the inverse design of photonic structures is a tool which is providing increasingly convincing results -- even though the wave nature of problems in photonics makes them particularly complex. In the meantime, the…

Inverse design refers to the problem of optimizing the input of an objective function in order to enact a target outcome. For many real-world engineering problems, the objective function takes the form of a simulator that predicts how the…

3D volumetric reconstruction from incomplete or noisy measurements is a fundamental problem in medical imaging and computational tomography. Deep image prior (DIP)-based methods have recently shown strong capability for solving inverse…

Computational Engineering, Finance, and Science · Computer Science 2026-05-29 Haijie Yuan , Chaoyan Huang , Srijita Bandopadhyay , Liyue Shen , Saiprasad Ravishankar

Voxel-based methods have achieved state-of-the-art performance for 3D object detection in autonomous driving. However, their significant computational and memory costs pose a challenge for their application to resource-constrained vehicles.…

Computer Vision and Pattern Recognition · Computer Science 2023-08-10 Tianchen Zhao , Xuefei Ning , Ke Hong , Zhongyuan Qiu , Pu Lu , Yali Zhao , Linfeng Zhang , Lipu Zhou , Guohao Dai , Huazhong Yang , Yu Wang

We discuss realization, properties and performance of the adaptive finite element approach to the design of nano-photonic components. Central issues are the construction of vectorial finite elements and the embedding of bounded components…

Optics · Physics 2015-05-13 Jan Pomplun , Sven Burger , Lin Zschiedrich , Frank Schmidt

Programmable optical circuits form a key part of quantum technologies today, ranging from transceivers for quantum communication to integrated photonic chips for quantum information processing. As the size of such circuits is increased,…

This paper presents a 55-line code written in python for 2D and 3D topology optimization (TO) based on the open-source finite element computing software (FEniCS), equipped with various finite element tools and solvers. PETSc is used as the…

Mathematical Software · Computer Science 2020-12-16 Abhinav Gupta , Rajib Chowdhury , Anupam Chakrabarti , Timon Rabczuk

pyGDM is a python toolkit for electro-dynamical simulations in nano-optics based on the Green Dyadic Method (GDM). In contrast to most other coupled-dipole codes, pyGDM uses a generalized propagator, which allows to cost-efficiently solve…

Computational Physics · Physics 2020-01-28 Peter R. Wiecha

Functionally Graded Materials (FGMs) made of soft constituents have emerged as promising material-structure systems in potential applications across many engineering disciplines, such as soft robots, actuators, energy harvesting, and tissue…

Computational Engineering, Finance, and Science · Computer Science 2025-07-01 Shiguang Deng , Horacio D. Espinosa , Wei Chen

We present a general and automated approach for computing model gradients for PDE solvers built on sparse spectral methods, and implement this capability in the widely used open-source Dedalus framework. We apply reverse-mode automatic…

Numerical Analysis · Mathematics 2026-04-15 Calum S. Skene , Keaton J. Burns

Inverse-designed nanophotonic media are a promising platform for compact optical neural networks, but training them end to end is expensive because each adjoint iteration couples the full-wave solver to the dataset minibatch, so the number…

Optics · Physics 2026-04-24 Azka Maula Iskandar Muda , Uğur Teğin