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Single-nucleus RNA sequencing (snRNA-seq) has significantly advanced our understanding of the disease etiology of neurodegenerative disorders. However, the low quality of specimens derived from postmortem brain tissues, combined with the…

Genomics · Quantitative Biology 2025-02-28 Gyutaek Oh , Baekgyu Choi , Seyoung Jin , Inkyung Jung , Jong Chul Ye

CrackMamba, a Mamba-based model, is designed for efficient and accurate crack segmentation for monitoring the structural health of infrastructure. Traditional Convolutional Neural Network (CNN) models struggle with limited receptive fields,…

Computer Vision and Pattern Recognition · Computer Science 2024-10-29 Xin Zuo , Yu Sheng , Jifeng Shen , Yongwei Shan

Transformers and their variants have achieved great success in speech processing. However, their multi-head self-attention mechanism is computationally expensive. Therefore, one novel selective state space model, Mamba, has been proposed as…

Audio and Speech Processing · Electrical Eng. & Systems 2025-03-04 Yang Xiao , Rohan Kumar Das

Recurrent neural networks and Transformers have recently dominated most applications in hyperspectral (HS) imaging, owing to their capability to capture long-range dependencies from spectrum sequences. However, despite the success of these…

Computer Vision and Pattern Recognition · Computer Science 2024-04-15 Jing Yao , Danfeng Hong , Chenyu Li , Jocelyn Chanussot

Recently, the Mamba architecture based on state space models has demonstrated remarkable performance in a series of natural language processing tasks and has been rapidly applied to remote sensing change detection (CD) tasks. However, most…

Computer Vision and Pattern Recognition · Computer Science 2025-05-20 Haotian Zhang , Keyan Chen , Chenyang Liu , Hao Chen , Zhengxia Zou , Zhenwei Shi

Accurate 3D medical image segmentation demands architectures capable of reconciling global context modeling with spatial topology preservation. While State Space Models (SSMs) like Mamba show potential for sequence modeling, existing…

Image and Video Processing · Electrical Eng. & Systems 2025-06-06 Hangyu Ji

This study explores replacing Transformers in Visual Language Models (VLMs) with Mamba, a recent structured state space model (SSM) that demonstrates promising performance in sequence modeling. We test models up to 3B parameters under…

Computer Vision and Pattern Recognition · Computer Science 2024-10-02 Georgios Pantazopoulos , Malvina Nikandrou , Alessandro Suglia , Oliver Lemon , Arash Eshghi

Unsupervised graph-level anomaly detection (UGLAD) is a critical and challenging task across various domains, such as social network analysis, anti-cancer drug discovery, and toxic molecule identification. However, existing methods often…

Machine Learning · Computer Science 2025-12-29 Yali Fu , Jindong Li , Qi Wang , Qianli Xing

Accurate medical image segmentation requires effective modeling of both global anatomical structures and fine-grained boundary details. Recent state space models (e.g., Vision Mamba) offer efficient long-range dependency modeling. However,…

Computer Vision and Pattern Recognition · Computer Science 2026-02-27 Fuhao Zhang , Lei Liu , Jialin Zhang , Ya-Nan Zhang , Nan Mu

The advent of single-cell multi-omics technologies has enabled the simultaneous profiling of diverse omics layers within individual cells. Integrating such multimodal data provides unprecedented insights into cellular identity, regulatory…

Cell Behavior · Quantitative Biology 2025-06-27 Zhen Yuan , Shaoqing Jiao , Yihang Xiao , Jiajie Peng

Accurate prediction of RNA-associated interactions is essential for understanding cellular regulation and advancing drug discovery. While Biological Large Language Models (BioLLMs) such as ESM-2 and RiNALMo provide powerful sequence…

Genomics · Quantitative Biology 2026-02-27 Rabeya Tus Sadia , Qiang Ye , Qiang Cheng

Designing computationally efficient network architectures remains an ongoing necessity in computer vision. In this paper, we adapt Mamba, a state-space language model, into VMamba, a vision backbone with linear time complexity. At the core…

Computer Vision and Pattern Recognition · Computer Science 2024-12-31 Yue Liu , Yunjie Tian , Yuzhong Zhao , Hongtian Yu , Lingxi Xie , Yaowei Wang , Qixiang Ye , Jianbin Jiao , Yunfan Liu

Although Mamba models greatly improve Hyperspectral Image (HSI) classification, they have critical challenges in terms defining efficient and adaptive token sequences for improve performance. This paper therefore presents CSSMamba…

Computer Vision and Pattern Recognition · Computer Science 2026-01-23 Zack Dewis , Yimin Zhu , Zhengsen Xu , Mabel Heffring , Saeid Taleghanidoozdoozan , Quinn Ledingham , Lincoln Linlin Xu

Selective state space models (SSMs), such as Mamba, highly excel at capturing long-range dependencies in 1D sequential data, while their applications to 2D vision tasks still face challenges. Current visual SSMs often convert images into 1D…

Computer Vision and Pattern Recognition · Computer Science 2025-02-27 Chaodong Xiao , Minghan Li , Zhengqiang Zhang , Deyu Meng , Lei Zhang

Recently the state space models (SSMs) with efficient hardware-aware designs, i.e., the Mamba deep learning model, have shown great potential for long sequence modeling. Meanwhile building efficient and generic vision backbones purely upon…

Computer Vision and Pattern Recognition · Computer Science 2024-11-15 Lianghui Zhu , Bencheng Liao , Qian Zhang , Xinlong Wang , Wenyu Liu , Xinggang Wang

Token-free language models learn directly from raw bytes and remove the inductive bias of subword tokenization. Operating on bytes, however, results in significantly longer sequences. In this setting, standard autoregressive Transformers…

Computation and Language · Computer Science 2024-08-13 Junxiong Wang , Tushaar Gangavarapu , Jing Nathan Yan , Alexander M. Rush

Recent advancements in the Mamba architecture, with its linear computational complexity, being a promising alternative to transformer architectures suffering from quadratic complexity. While existing works primarily focus on adapting Mamba…

Computer Vision and Pattern Recognition · Computer Science 2025-03-12 Jie Hu , Junwei Zheng , Jiale Wei , Jiaming Zhang , Rainer Stiefelhagen

Foundation models, now powering most of the exciting applications in deep learning, are almost universally based on the Transformer architecture and its core attention module. Many subquadratic-time architectures such as linear attention,…

Machine Learning · Computer Science 2024-06-03 Albert Gu , Tri Dao

Existing video camouflaged object detection (VCOD) methods primarily rely on spatial appearances for motion perception. However, the high foreground-background similarity in VCOD limits the discriminability of such features (e.g. color and…

Computer Vision and Pattern Recognition · Computer Science 2026-02-10 Xin Li , Keren Fu , Qijun Zhao

Underwater Monocular Depth Estimation (UMDE) is a critical task that aims to estimate high-precision depth maps from underwater degraded images caused by light absorption and scattering effects in marine environments. Recently, Mamba-based…

Computer Vision and Pattern Recognition · Computer Science 2025-07-11 Peixian Zhuang , Yijian Wang , Zhenqi Fu , Hongliang Zhang , Sam Kwong , Chongyi Li