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Recent literature on fine-tuning Large Language Models highlights a fundamental debate. While Full Fine-Tuning (FFT) provides the representational plasticity required for high-entropy knowledge injection, Low-Rank Adaptation (LoRA) can…

Computation and Language · Computer Science 2026-05-19 Haozhan Tang , Xiuqi Zhu , Xinyin Zhang , Boxun Li , Virginia Smith , Kevin Kuo

Large pre-trained language models (PLMs) have shown remarkable performance across various natural language understanding (NLU) tasks, particularly in low-resource settings. Nevertheless, their potential in Automatic Speech Recognition (ASR)…

Computation and Language · Computer Science 2023-06-13 Aravind Krishnan , Jesujoba Alabi , Dietrich Klakow

Finetuning a Large Language Model (LLM) is crucial for generating results towards specific objectives. This research delves into the realm of drug optimization and introduce a novel reinforcement learning algorithm to finetune a drug…

Machine Learning · Computer Science 2025-02-12 Xuefeng Liu , Songhao Jiang , Siyu Chen , Zhuoran Yang , Yuxin Chen , Ian Foster , Rick Stevens

As the parameters of Large Language Models (LLMs) have scaled to hundreds of billions, the demand for efficient training methods -- balancing faster computation and reduced memory usage without sacrificing accuracy -- has become more…

Machine Learning · Computer Science 2025-03-03 Kaan Ozkara , Tao Yu , Youngsuk Park

Optimization problems seek to find the best solution to an objective under a set of constraints, and have been widely investigated in real-world applications. Modeling and solving optimization problems in a specific domain typically require…

Optimization and Control · Mathematics 2024-07-12 Jihai Zhang , Wei Wang , Siyan Guo , Li Wang , Fangquan Lin , Cheng Yang , Wotao Yin

Large Language Models (LLMs) have significantly advanced natural language processing with exceptional task generalization capabilities. Low-Rank Adaption (LoRA) offers a cost-effective fine-tuning solution, freezing the original model…

Machine Learning · Computer Science 2025-03-18 Jun Zhang , Jue Wang , Huan Li , Lidan Shou , Ke Chen , Yang You , Guiming Xie , Xuejian Gong , Kunlong Zhou

Large language model (LLM)-based automatic speech recognition (ASR) achieves strong performance but often incurs high computational costs. This work investigates how to obtain the best LLM-ASR performance efficiently. Through comprehensive…

Sound · Computer Science 2025-08-07 Bingshen Mu , Yiwen Shao , Kun Wei , Dong Yu , Lei Xie

Studying protein mutations within amino acid sequences holds tremendous significance in life sciences. Protein language models (PLMs) have demonstrated strong capabilities in broad biological applications. However, due to architectural…

Machine Learning · Computer Science 2024-10-31 Yizhen Luo , Zikun Nie , Massimo Hong , Suyuan Zhao , Hao Zhou , Zaiqing Nie

Masked language modeling (MLM) plays a key role in pretraining large language models. But the MLM objective is often dominated by high-frequency words that are sub-optimal for learning factual knowledge. In this work, we propose an approach…

Computation and Language · Computer Science 2023-04-05 Nafis Sadeq , Byungkyu Kang , Prarit Lamba , Julian McAuley

Looped language models (LoopLMs) perform iterative latent computation to refine internal representations, offering a promising alternative to explicit chain-of-thought (CoT) reasoning. However, existing reinforcement learning (RL) paradigms…

Computation and Language · Computer Science 2026-03-23 Guo Tang , Shixin Jiang , Heng Chang , Nuo Chen , Yuhan Li , Huiming Fan , Jia Li , Ming Liu , Bing Qin

Reinforcement learning with human feedback for aligning large language models (LLMs) trains a reward model typically using ranking loss with comparison pairs.However, the training procedure suffers from an inherent problem: the uncontrolled…

Computation and Language · Computer Science 2024-09-19 Hang Zhou , Chenglong Wang , Yimin Hu , Tong Xiao , Chunliang Zhang , Jingbo Zhu

Aligning large language models (LLMs) with human preferences is essential for safe and useful LLMs. Previous works mainly adopt reinforcement learning (RLHF) and direct preference optimization (DPO) with human feedback for alignment.…

Computation and Language · Computer Science 2023-10-03 Tianci Xue , Ziqi Wang , Heng Ji

Pretrained models have produced great success in both Computer Vision (CV) and Natural Language Processing (NLP). This progress leads to learning joint representations of vision and language pretraining by feeding visual and linguistic…

Computer Vision and Pattern Recognition · Computer Science 2022-05-05 Siqu Long , Feiqi Cao , Soyeon Caren Han , Haiqin Yang

The pretrain-transfer paradigm, which underpins the success of large language models (LLMs), has demonstrated the immense power of creating foundation models that learn generalizable representations from vast datasets. However, extending…

Machine Learning · Computer Science 2025-09-30 Yunhao Liang , Pujun Zhang , Yuan Qu , Shaochong Lin , Zuo-jun Max Shen

Computational biology and bioinformatics provide vast data gold-mines from protein sequences, ideal for Language Models taken from NLP. These LMs reach for new prediction frontiers at low inference costs. Here, we trained two…

Fine-tuning large language models (LLMs) is crucial for improving their performance on downstream tasks, but full-parameter fine-tuning (Full-FT) is computationally expensive and memory-intensive. Parameter-efficient fine-tuning (PEFT)…

Computation and Language · Computer Science 2026-05-12 Longteng Zhang , Lin Zhang , Shaohuai Shi , Xiaowen Chu , Bo Li

In recent years, there has been a surge in the development of 3D structure-based pre-trained protein models, representing a significant advancement over pre-trained protein language models in various downstream tasks. However, most existing…

Machine Learning · Computer Science 2024-06-04 Jiale Zhao , Wanru Zhuang , Jia Song , Yaqi Li , Shuqi Lu

Pre-training a language model and then fine-tuning it has shown to be an efficient and effective technique for a wide range of code intelligence tasks, such as code generation, code summarization, and vulnerability detection. However,…

Software Engineering · Computer Science 2025-01-08 Zhangqian Bi , Yao Wan , Zhaoyang Chu , Yufei Hu , Junyi Zhang , Hongyu Zhang , Guandong Xu , Hai Jin

With the development of next generation sequencing techniques, it is fast and cheap to determine protein sequences but relatively slow and expensive to extract useful information from protein sequences because of limitations of traditional…

Quantitative Methods · Quantitative Biology 2017-10-20 Renzhi Cao , Colton Freitas , Leong Chan , Miao Sun , Haiqing Jiang , Zhangxin Chen

Large Language Models (LLMs) have showcased remarkable capabilities in following human instructions. However, recent studies have raised concerns about the robustness of LLMs when prompted with instructions combining textual adversarial…

Computation and Language · Computer Science 2024-02-27 Yuansen Zhang , Xiao Wang , Zhiheng Xi , Han Xia , Tao Gui , Qi Zhang , Xuanjing Huang