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Discrete time, spatially extended models play an important role in ecology, modelling population dynamics of species ranging from micro-organisms to birds. An important question is how 'bottom up', individual-based models can be…

Populations and Evolution · Quantitative Biology 2023-01-20 Linnéa Gyllingberg , David J. T. Sumpter , Åke Brännström

Population size estimation based on the capture-recapture experiment is an interesting problem in various fields including epidemiology, criminology, demography, etc. In many real-life scenarios, there exists inherent heterogeneity among…

Methodology · Statistics 2023-08-01 Kiranmoy Chatterjee , Prajamitra Bhuyan

To effectively monitor biodiversity in streams and rivers, we need to quantify species distribution accurately. Occupancy models are useful for distinguishing between the non-detection of a species and its actual absence. While these models…

Applications · Statistics 2024-09-17 Olivier Gimenez

We develop an inference framework for spatial capture-recapture data when two methods are used in which individuality cannot generally be reconciled between the two methods. A special case occurs in camera trapping when left-side (method 1)…

Methodology · Statistics 2015-04-21 J. Andrew Royle

Plant-capture is a variant of classical capture-recapture methods used to estimate the size of a population. In this method, decoys referred to as "plants" are introduced into the population in order to estimate the capture probability. The…

Methodology · Statistics 2025-06-25 Yiran Wang , Martin Lysy , Audrey Béliveau

Area-level models for small area estimation typically rely on areal random effects to shrink design-based direct estimates towards a model-based predictor. Incorporating the spatial dependence of the random effects into these models can…

Methodology · Statistics 2024-04-22 Sho Kawano , Paul A. Parker , Zehang Richard Li

Traditional approaches to ecosystem modelling have relied on spatially homogeneous approximations to interaction, growth and death. More recently, spatial interaction and dispersal have also been considered. While these leads to certain…

Populations and Evolution · Quantitative Biology 2010-10-07 Thomas Adams \ast , Graeme Ackland , Glenn Marion , Colin Edwards

Ecologists increasingly rely on Bayesian methods to fit capture-recapture models. Capture-recapture models are used to estimate abundance while accounting for imperfect detectability in individual-level data. A variety of implementations…

Methodology · Statistics 2023-02-01 Mevin B Hooten , Michael R Schwob , Devin S Johnson , Jacob S. Ivan

Scene coordinates regression (SCR), i.e., predicting 3D coordinates for every pixel of a given image, has recently shown promising potential. However, existing methods remain limited to small scenes memorized during training, and thus…

Computer Vision and Pattern Recognition · Computer Science 2023-12-01 Jerome Revaud , Yohann Cabon , Romain Brégier , JongMin Lee , Philippe Weinzaepfel

Spatial patterning is common in ecological systems and has been extensively studied via different modeling approaches. Individual-based models (IBMs) accurately describe nonlinear interactions at the organism level and the stochastic…

Populations and Evolution · Quantitative Biology 2025-04-16 Anudeep Surendran , David Pinto-Ramos , Rafael Menezes , Ricardo Martinez-Garcia

Many ant species employ distributed population density estimation in applications ranging from quorum sensing [Pra05], to task allocation [Gor99], to appraisal of enemy colony strength [Ada90]. It has been shown that ants estimate density…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-08 Cameron Musco , Hsin-Hao Su , Nancy Lynch

In this paper, we propose a Spatial Robust Mixture Regression model to investigate the relationship between a response variable and a set of explanatory variables over the spatial domain, assuming that the relationships may exhibit complex…

Methodology · Statistics 2021-09-30 Wennan Chang , Pengtao Dang , Changlin Wan , Xiaoyu Lu , Yue Fang , Tong Zhao , Yong Zang , Bo Li , Chi Zhang , Sha Cao

Dual-record system (DRS) (equivalently two sample Capture-recapture experiment) model with time and behavioral response variation, has attracted much attention specifically in the domain of Official Statistics and Epidemiology. The relevant…

Methodology · Statistics 2019-08-09 Kiranmoy Chatterjee , Diganta Mukherjee

There is mounting empirical evidence that many communities of living organisms display key features which closely resemble those of physical systems at criticality. We here introduce a minimal model framework for the dynamics of a community…

Biological Physics · Physics 2020-02-17 Fabio Peruzzo , Mauro Mobilia , Sandro Azaele

The accuracy assessment of remote-sensing derived built-up land data represents a specific case of binary map comparison, where class imbalance varies considerably across rural-urban trajectories. Thus, local accuracy characterization of…

Physics and Society · Physics 2024-03-04 Johannes H. Uhl , Stefan Leyk

Relative survival represents the preferred framework for the analysis of population cancer survival data. The aim is to model the survival probability associated to cancer in the absence of information about the cause of death. Recent data…

Random walks and related spatial stochastic models have been used in a range of application areas including animal and plant ecology, infectious disease epidemiology, developmental biology, wound healing, and oncology. Classical random walk…

Populations and Evolution · Quantitative Biology 2025-08-22 Michael J. Plank , Matthew J. Simpson , Ruth E. Baker

To better understand the dynamics of human settlements, thorough knowledge of the uncertainty in geospatial built-up surface datasets is critical. While frameworks for localized accuracy assessments of categorical gridded data have been…

Physics and Society · Physics 2022-06-23 Johannes H. Uhl , Stefan Leyk

Motivated by various applications, we consider the problem of homogeneous human population size (N) estimation from Dual-record system (DRS) (equivalently, two-sample capture-recapture experiment). The likelihood estimate from the…

Methodology · Statistics 2015-04-07 Kiranmoy Chatterjee , Diganta Mukherjee

This work is concerned with the estimation of hard-to-reach population sizes using a single respondent-driven sampling (RDS) survey, a variant of chain-referral sampling that leverages social relationships to reach members of a hidden…