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In drug-discovery-related tasks such as virtual screening, machine learning is emerging as a promising way to predict molecular properties. Conventionally, molecular fingerprints (numerical representations of molecules) are calculated…

Machine Learning · Computer Science 2019-11-13 Shion Honda , Shoi Shi , Hiroki R. Ueda

The use of eco-friendly materials for the environment has been addressed as a critical issue in the development of systems for renewable energy applications. In this regard, the investigation of organic photovoltaic (OPV) molecules for the…

Chemical Physics · Physics 2017-01-13 Alfredo Guillén-López , Miguel Robles , Jesús Muñiz

Geometric deep learning has demonstrated a great potential in non-Euclidean data analysis. The incorporation of geometric insights into learning architecture is vital to its success. Here we propose a curvature-enhanced graph convolutional…

Quantitative Methods · Quantitative Biology 2023-06-27 Cong Shen , Pingjian Ding , Junjie Wee , Jialin Bi , Jiawei Luo , Kelin Xia

We introduce Functional Group-Aware Representations for Small Molecules (FARM), a novel foundation model designed to bridge the gap between SMILES, natural language, and molecular graphs. The key idea behind FARM is the incorporation of…

Machine Learning · Computer Science 2026-04-29 Thao Nguyen , Kuan-Hao Huang , Ge Liu , Martin D. Burke , Ying Diao , Heng Ji

Optical Chemical Structure Recognition (OCSR) is critical for converting 2D molecular diagrams from printed literature into machine-readable formats. While Vision-Language Models have shown promise in end-to-end OCR tasks, their direct…

Computer Vision and Pattern Recognition · Computer Science 2026-04-22 Haocheng Tang , Xingyu Dang , Junmei Wang

Optimizing solution-processed organic solar cells is a complex task due to the vast parameter space in organic photovoltaics (OPV). Classical Edisonian or one-variable-at-a-time (OVAT) optimization approaches are laborious, time-consuming,…

While graph neural networks have shown remarkable success in molecular property prediction, current approaches like the Equivariant Subgraph Aggregation Networks (ESAN) treat molecules as bags of independent substructures, overlooking…

Machine Learning · Computer Science 2025-12-16 Shuhui Qu , Cheolwoo Park

Graph classification is a significant problem in many scientific domains. It addresses tasks such as the classification of proteins and chemical compounds into categories according to their functions, or chemical and structural properties.…

Machine Learning · Computer Science 2019-02-25 Marcelo Daniel Gutierrez Mallea , Peter Meltzer , Peter J Bentley

Tabular data is a common form of organizing data. Multiple models are available to generate synthetic tabular datasets where observations are independent, but few have the ability to produce relational datasets. Modeling relational data is…

Machine Learning · Computer Science 2023-02-07 Aivin V. Solatorio , Olivier Dupriez

Retrosynthesis prediction is a fundamental problem in organic synthesis, where the task is to identify precursor molecules that can be used to synthesize a target molecule. A key consideration in building neural models for this task is…

Machine Learning · Computer Science 2021-06-07 Vignesh Ram Somnath , Charlotte Bunne , Connor W. Coley , Andreas Krause , Regina Barzilay

The automatic recognition of tabular data in document images presents a significant challenge due to the diverse range of table styles and complex structures. Tables offer valuable content representation, enhancing the predictive…

Computer Vision and Pattern Recognition · Computer Science 2024-04-22 Avinash Anand , Raj Jaiswal , Pijush Bhuyan , Mohit Gupta , Siddhesh Bangar , Md. Modassir Imam , Rajiv Ratn Shah , Shin'ichi Satoh

To build recommender systems that not only consider user-item interactions represented as ordinal variables, but also exploit the social network describing the relationships between the users, we develop a hierarchical Bayesian model termed…

Information Retrieval · Computer Science 2022-09-13 Dongsheng Wang , Chaojie Wang , Bo Chen , Mingyuan Zhou

The shape of a molecule determines its physicochemical and biological properties. However, it is often underrepresented in standard molecular representation learning approaches. Here, we propose using the Euler Characteristic Transform…

Machine Learning · Computer Science 2025-07-08 Victor Toscano-Duran , Florian Rottach , Bastian Rieck

Indoor monocular semantic scene completion (MSSC) is notably more challenging than its outdoor counterpart due to complex spatial layouts and severe occlusions. While transformers are well suited for modeling global dependencies, their high…

Computer Vision and Pattern Recognition · Computer Science 2026-03-27 Xuzhi Wang , Xinran Wu , Song Wang , Lingdong Kong , Ziping Zhao

Although vision transformers (ViTs) have achieved great success in computer vision, the heavy computational cost hampers their applications to dense prediction tasks such as semantic segmentation on mobile devices. In this paper, we present…

Computer Vision and Pattern Recognition · Computer Science 2022-04-13 Wenqiang Zhang , Zilong Huang , Guozhong Luo , Tao Chen , Xinggang Wang , Wenyu Liu , Gang Yu , Chunhua Shen

Current semantic segmentation models have achieved great success under the independent and identically distributed (i.i.d.) condition. However, in real-world applications, test data might come from a different domain than training data.…

Computer Vision and Pattern Recognition · Computer Science 2023-05-23 Jian Ding , Nan Xue , Gui-Song Xia , Bernt Schiele , Dengxin Dai

Accurate prediction of small molecule solubility using material-sparing approaches is critical for accelerating synthesis and process optimization, yet experimental measurement is costly and many learning approaches either depend on…

An analytical solution for the optical efficiency of a luminescent solar concentrator is presented. Due to a large number of input parameters and their complex effect on the device efficiency numerical simulations have been previously used…

Optics · Physics 2020-03-16 Ilya Sychugov

Accurately predicting the survival rate of cancer patients is crucial for aiding clinicians in planning appropriate treatment, reducing cancer-related medical expenses, and significantly enhancing patients' quality of life. Multimodal…

Computer Vision and Pattern Recognition · Computer Science 2024-03-15 Liangrui Pan , Yijun Peng , Yan Li , Xiang Wang , Wenjuan Liu , Liwen Xu , Qingchun Liang , Shaoliang Peng

In deep neural networks, better results can often be obtained by increasing the complexity of previously developed basic models. However, it is unclear whether there is a way to boost performance by decreasing the complexity of such models.…

Machine Learning · Computer Science 2021-09-07 Junran Wu , Jianhao Li , Yicheng Pan , Ke Xu
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