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We study the effect of speciation, i.e. the introduction of new species through evolution into communities, in the setting of predator-prey systems. Predator-prey dynamics is classically well modeled by Lotka-Volterra equations, also when…

Populations and Evolution · Quantitative Biology 2025-03-20 Christian Hamster , Jorik Schaap , Peter van Heijster , Joshua Dijksman

Multi-species distribution modeling, which relates the occurrence of multiple species to environmental variables, is an important tool used by ecologists for both predicting the distribution of species in a community and identifying the…

Applications · Statistics 2015-09-17 Francis K. C. Hui , David I. Warton , Scott D. Foster

The assembly and persistence of ecological communities can be understood as the result of the interaction and migration of species. Here we study a single community subject to migration from a species pool in which inter-specific…

Populations and Evolution · Quantitative Biology 2023-07-27 Matthew Dopson , Clive Emary

Spatial models for areal data are often constructed such that all pairs of adjacent regions are assumed to have near-identical spatial autocorrelation. In practice, data can exhibit dependence structures more complicated than can be…

Methodology · Statistics 2024-07-04 Michael F. Christensen , Peter D. Hoff

Predicting species distributions using occupancy models accounting for imperfect detection is now commonplace in ecology. Recently, modelling spatial and temporal autocorrelation was proposed to alleviate the lack of replication in…

Applications · Statistics 2025-10-10 André Luís Luza , Didier Alard , Frédéric Barraquand

Mutualistic networks are formed when the interactions between two classes of species are mutually beneficial. They are important examples of cooperation shaped by evolution. Mutualism between animals and plants plays a key role in the…

Populations and Evolution · Quantitative Biology 2013-08-23 Samir Suweis , Filippo Simini , Jayanth R. Banavar , Amos Maritan

Species distribution models usually attempt to explain presence-absence or abundance of a species at a site in terms of the environmental features (socalled abiotic features) present at the site. Historically, such models have considered…

Methodology · Statistics 2018-09-25 Shinichiro Shirota , Alan E. Gelfand , Sudipto Banerjee

Species interactions (ranging from direct predator prey relationships to indirect effects mediated by the environment) are central to ecosystem balance and biodiversity. While empirical methods for measuring these interactions exist, their…

Populations and Evolution · Quantitative Biology 2025-08-27 Javier Aguilar , Samir Suweis , Amos Maritan , Sandro Azaele

Noise and spatial degrees of freedom characterize most ecosystems. Some aspects of their influence on the coevolution of populations with cyclic interspecies competition have been demonstrated in recent experiments [e.g. B. Kerr et al.,…

Populations and Evolution · Quantitative Biology 2007-12-08 Tobias Reichenbach , Mauro Mobilia , Erwin Frey

Evolutionary and ecosystem dynamics are often treated as different processes --operating at separate timescales-- even if evidence reveals that rapid evolutionary changes can feed back into ecological interactions. A recent long-term field…

Populations and Evolution · Quantitative Biology 2018-10-04 Paula Villa Martín , Jorge Hidalgo , Rafael Rubio de Casas , Miguel A. Muñoz

In spatial data, location-dependent variation leads to connected structures known as features. Variations occur at different spatial scales and possibly originate from distinct underlying processes. Each of these scales is characterized by…

Methodology · Statistics 2022-03-08 Roman Flury , Tuomas Aakala , Leena Ruha , Timo Kuuluvainen , Reinhard Furrer

Eco-evolutionary frameworks can explain certain features of communities in which ecological and evolutionary processes occur over comparable timescales. Here, we investigate whether an evolutionary dynamics may interact with the spatial…

Populations and Evolution · Quantitative Biology 2019-12-04 Eduardo H. Colombo , Ricardo Martínez-García , Cristóbal , López , Emilio Hernández-García

We introduce the Webworld model, which links together the ecological modelling of food web structure with the evolutionary modelling of speciation and extinction events. The model describes dynamics of ecological communities on an…

adap-org · Physics 2007-05-23 Guido Caldarelli , Paul G. Higgs , Alan J. McKane

Better understanding the natural world is a crucial task with a wide range of applications. In environments with close proximity between humans and animals, such as zoos, it is essential to better understand the causes behind animal…

The US weather radar archive holds detailed information about biological phenomena in the atmosphere over the last 20 years. Communally roosting birds congregate in large numbers at nighttime roosting locations, and their morning exodus…

Computer Vision and Pattern Recognition · Computer Science 2020-04-28 Zezhou Cheng , Saadia Gabriel , Pankaj Bhambhani , Daniel Sheldon , Subhransu Maji , Andrew Laughlin , David Winkler

Ecological communities with many species can be classified into dynamical phases. In systems with all-to-all interactions, a phase where a fixed point is always reached and a dynamically-fluctuating phase have been found. The dynamics when…

Populations and Evolution · Quantitative Biology 2023-08-04 Stav Marcus , Ari M Turner , Guy Bunin

Formation and competition of associations are studied in a six-species ecological model where each species has two predators and two prey. Each site of a square lattice is occupied by an individual belonging to one of the six species. The…

Populations and Evolution · Quantitative Biology 2008-08-26 G. Szabo , A. Szolnoki , I. Borsos

Explaining the wide range of dynamics observed in ecological communities is challenging due to the large number of species involved, the complex network of interactions among them, and the influence of multiple environmental variables.…

Populations and Evolution · Quantitative Biology 2025-03-28 Francesco Ferraro , Christian Grilletta , Emanuele Pigani , Samir Suweis , Sandro Azaele , Amos Maritan

Climate change threatens biodiversity directly by influencing biophysical variables that drive species' geographic distributions and indirectly through socio-economic changes that influence land use patterns, driven by global consumption,…

Populations and Evolution · Quantitative Biology 2020-02-10 Simon Kapitza , Pham Van Ha , Tom Kompas , Nick Golding , Natasha C. R. Cadenhead , Payal Bal , Brendan A. Wintle

Spatially extended population dynamics models that incorporate intrinsic noise serve as case studies for the role of fluctuations and correlations in biological systems. Including spatial structure and stochastic noise in predator-prey…

Statistical Mechanics · Physics 2018-01-09 Ulrich Dobramysl , Mauro Mobilia , Michel Pleimling , Uwe C. Täuber
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