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Related papers: Open-source Polymer Generative Pipeline

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Hyperparameter tuning of multi-stage pipelines introduces a significant computational burden. Motivated by the observation that work can be reused across pipelines if the intermediate computations are the same, we propose a pipeline-aware…

Machine Learning · Computer Science 2019-03-14 Liam Li , Evan Sparks , Kevin Jamieson , Ameet Talwalkar

Peptide self-assembly prediction offers a powerful bottom-up strategy for designing biocompatible, low-toxicity materials for large-scale synthesis in a broad range of biomedical and energy applications. However, screening the vast sequence…

Biomolecules · Quantitative Biology 2026-04-23 Nuno Costa , Julija Zavadlav

Generative artificial intelligence offers a promising avenue for materials discovery, yet its advantages over traditional methods remain unclear. In this work, we introduce and benchmark two baseline approaches - random enumeration of…

Materials Science · Physics 2025-07-02 Nathan J. Szymanski , Christopher J. Bartel

Countermeasures to effectively fight the ever increasing hate speech online without blocking freedom of speech is of great social interest. Natural Language Generation (NLG), is uniquely capable of developing scalable solutions. However,…

Computation and Language · Computer Science 2021-06-04 Wanzheng Zhu , Suma Bhat

Machine learning pipelines that include a combinatorial optimization layer can give surprisingly efficient heuristics for difficult combinatorial optimization problems. Three questions remain open: which architecture should be used, how…

Robotics · Computer Science 2023-02-07 Axel Parmentier

The discovery of inorganic crystal structures with targeted properties is a significant challenge in materials science. Generative models, especially state-of-the-art diffusion models, offer the promise of modeling complex data…

Advances in CAD and CAM have enabled engineers and design teams to digitally design parts with unprecedented ease. Software solutions now come with a range of modules for optimizing designs for performance requirements, generating…

Computational Engineering, Finance, and Science · Computer Science 2024-09-06 Hongrui Chen , Aditya Joglekar , Zack Rubinstein , Bradley Schmerl , Gary Fedder , Jan de Nijs , David Garlan , Stephen Smith , Levent Burak Kara

We consider different structures, which can be obtained by polymerization of aromatic organic molecules under high pressures. These 2D and 3D covalently bonded organic polymers and their functionalization can pave the way to production of…

Materials Science · Physics 2021-11-30 V. V. Brazhkin , N. A. Nikolaev , Y. M. Shulga , Y. B. Lebed , M. V. Kondrin

We present TopoGaussian, a holistic, particle-based pipeline for inferring the interior structure of an opaque object from easily accessible photos and videos as input. Traditional mesh-based approaches require tedious and error-prone mesh…

Computer Vision and Pattern Recognition · Computer Science 2025-03-18 Xiaoyu Xiong , Changyu Hu , Chunru Lin , Pingchuan Ma , Chuang Gan , Tao Du

Particle filters are applicable to a wide range of nonlinear, non-Gaussian state-space models and have already been applied to a variety of problems. However, there is a problem in the calculation of smoothed distributions, where particles…

Computation · Statistics 2024-05-16 G. Kitagawa

The Python package pylimer-tools is a comprehensive toolkit for computational studies of polymer networks, particularly bead-spring networks. The package provides functionality to generate polymer networks using Monte Carlo (MC) procedures…

Soft Condensed Matter · Physics 2025-08-18 Tim Bernhard , Fabian Schwarz , Andrei A. Gusev

We investigate polymer partitioning from polymer mixtures into nanometer size cavities by formulating an equation of state for a binary polymer mixture assuming that only one (smaller) of the two polymer components can penetrate the cavity.…

Soft Condensed Matter · Physics 2015-06-11 Rudolf Podgornik , Jaime Hopkins , V. Adrian Parsegian , Murugappan Muthukumar

Machine learning has been gaining traction in recent years to meet the demand for tools that can efficiently analyze and make sense of the ever-growing databases of biomedical data in health care systems around the world. However,…

Neural and Evolutionary Computing · Computer Science 2017-02-08 Andrew Sohn , Randal S. Olson , Jason H. Moore

Discovering functional crystalline materials entails navigating an immense combinatorial design space. While recent advances in generative artificial intelligence have enabled the sampling of chemically plausible compositions and…

Machine Learning · Computer Science 2025-11-11 Hyunsoo Park , Aron Walsh

Automated Machine Learning (AutoML) is a promising direction for democratizing AI by automatically deploying Machine Learning systems with minimal human expertise. The core technical challenge behind AutoML is optimizing the pipelines of…

Machine Learning · Computer Science 2023-05-26 Sebastian Pineda Arango , Josif Grabocka

Engineering simple, artificial models of living cells allows synthetic biologists to study cellular functions under well-controlled conditions. Reconstituting multicellular behaviors with synthetic cell-mimics is still a challenge because…

Biomolecules · Quantitative Biology 2021-04-29 Imre Banlaki , Francois-Xavier Lehr , Henrike Niederholtmeyer

Because of the recent trends in Deep Neural Networks (DNN) models being memory-bound, inter-operator pipelining for DNN accelerators is emerging as a promising optimization. Inter-operator pipelining reduces costly on-chip global memory and…

Hardware Architecture · Computer Science 2024-05-06 Raveesh Garg , Hyoukjun Kwon , Eric Qin , Yu-Hsin Chen , Tushar Krishna , Liangzhen Lai

Generative molecular design has moved from proof-of-concept to real-world applicability, as marked by the surge in very recent papers reporting experimental validation. Key challenges in explainability and sample efficiency present…

Biomolecules · Quantitative Biology 2024-03-05 Jeff Guo , Philippe Schwaller

The research community continues to seek increasingly more advanced synthetic data generators to reliably evaluate the strengths and limitations of machine learning methods. This work aims to increase the availability of datasets…

Machine Learning · Computer Science 2026-01-30 Joanna Komorniczak

We present a simulation of various active learning strategies for the discovery of polymer solar cell donor/acceptor pairs using data extracted from the literature spanning $\sim$20 years by a natural language processing pipeline. While…

Materials Science · Physics 2024-08-08 Pranav Shetty , Aishat Adeboye , Sonakshi Gupta , Chao Zhang , Rampi Ramprasad