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Diffusion-based voxel prior modelling is challenging for the reconstruction of large-scale 3D porous microstructures. Due to the demanding requirements for simultaneously modelling both the continuous pore morphology and the discrete…

Computer Vision and Pattern Recognition · Computer Science 2026-05-06 Yue Shi , Peng Wang , Mingzhe Yu , Yunlong Zhao , Li Liu , Gareth D Hatton , Yan Lyu , Liangxiu Han

Generative models of macromolecules carry abundant and impactful implications for industrial and biomedical efforts in protein engineering. However, existing methods are currently limited to modeling protein structures or sequences,…

Biomolecules · Quantitative Biology 2024-01-15 Alex Morehead , Jeffrey Ruffolo , Aadyot Bhatnagar , Ali Madani

Diffusion models are a new class of generative models, and have dramatically promoted image generation with unprecedented quality and diversity. Existing diffusion models mainly try to reconstruct input image from a corrupted one with a…

Computer Vision and Pattern Recognition · Computer Science 2024-06-05 Ling Yang , Jingwei Liu , Shenda Hong , Zhilong Zhang , Zhilin Huang , Zheming Cai , Wentao Zhang , Bin Cui

Equipping a deep model the abaility of few-shot learning, i.e., learning quickly from only few examples, is a core challenge for artificial intelligence. Gradient-based meta-learning approaches effectively address the challenge by learning…

Machine Learning · Computer Science 2024-01-09 Baoquan Zhang , Chuyao Luo , Demin Yu , Huiwei Lin , Xutao Li , Yunming Ye , Bowen Zhang

We propose a simple, efficient, yet powerful framework for dense visual predictions based on the conditional diffusion pipeline. Our approach follows a "noise-to-map" generative paradigm for prediction by progressively removing noise from a…

Computer Vision and Pattern Recognition · Computer Science 2023-05-16 Yuanfeng Ji , Zhe Chen , Enze Xie , Lanqing Hong , Xihui Liu , Zhaoqiang Liu , Tong Lu , Zhenguo Li , Ping Luo

Discrete diffusion models, like continuous diffusion models, generate high-quality samples by gradually undoing noise applied to datapoints with a Markov process. Gradual generation in theory comes with many conceptual benefits; for…

Machine Learning · Computer Science 2025-09-30 Alan N. Amin , Nate Gruver , Andrew Gordon Wilson

Few-shot instance segmentation extends the few-shot learning paradigm to the instance segmentation task, which tries to segment instance objects from a query image with a few annotated examples of novel categories. Conventional approaches…

Computer Vision and Pattern Recognition · Computer Science 2024-01-23 Minh-Quan Le , Tam V. Nguyen , Trung-Nghia Le , Thanh-Toan Do , Minh N. Do , Minh-Triet Tran

The goal of protein design is to generate amino acid sequences that fold into functional structures with desired properties. Prior methods combining autoregressive language models with Monte Carlo Tree Search (MCTS) struggle with long-range…

Machine Learning · Computer Science 2026-02-25 Xuefeng Liu , Mingxuan Cao , Songhao Jiang , Xiao Luo , Xiaotian Duan , Mengdi Wang , Tobin R. Sosnick , Jinbo Xu , Rick Stevens

The AlphaFold Protein Structure Database (AFDB) offers unparalleled structural coverage at near-experimental accuracy, positioning it as a valuable resource for data-driven protein design. However, its direct use in training deep models…

Machine Learning · Computer Science 2025-06-11 Cheng Tan , Zhenxiao Cao , Zhangyang Gao , Siyuan Li , Yufei Huang , Stan Z. Li

Diffusion-based inpainting is a powerful tool for the reconstruction of images from sparse data. Its quality strongly depends on the choice of known data. Optimising their spatial location -- the inpainting mask -- is challenging. A…

Image and Video Processing · Electrical Eng. & Systems 2022-05-17 Tobias Alt , Pascal Peter , Joachim Weickert

Accurate prediction of mobile traffic, i.e., network traffic from cellular base stations, is crucial for optimizing network performance and supporting urban development. However, the non-stationary nature of mobile traffic, driven by human…

Machine Learning · Computer Science 2025-06-30 Zhi Sheng , Daisy Yuan , Jingtao Ding , Yong Li

Given native 2D contact map, protein 3D structure could be reconstructed with accuracy of 2A or better, and such reconstruction is a feasible computational approach for protein folding problem. The prediction accuracy from traditional…

Biomolecules · Quantitative Biology 2019-06-12 Yuhong Wang , Wei Li , Hongmao Sun , Kennie Cruz-Gutierrez

We introduce MRF-DiPh, a novel physics informed denoising diffusion approach for multiparametric tissue mapping from highly accelerated, transient-state quantitative MRI acquisitions like Magnetic Resonance Fingerprinting (MRF). Our method…

Image and Video Processing · Electrical Eng. & Systems 2025-07-01 Perla Mayo , Carolin M. Pirkl , Alin Achim , Bjoern Menze , Mohammad Golbabaee

Masked graph autoencoders have emerged as a powerful graph self-supervised learning method that has yet to be fully explored. In this paper, we unveil that the existing discrete edge masking and binary link reconstruction strategies are…

Machine Learning · Computer Science 2024-02-07 Ziwen Zhao , Yuhua Li , Yixiong Zou , Jiliang Tang , Ruixuan Li

Augmentation for dense prediction typically relies on either sample mixing or generative synthesis. Mixing improves robustness but misaligned masks yield soft label ambiguity. Diffusion synthesis increases apparent diversity but, when…

Computer Vision and Pattern Recognition · Computer Science 2025-11-06 Pengyu Jie , Wanquan Liu , Rui He , Yihui Wen , Deyu Meng , Chenqiang Gao

Diffusion models are extensively used for modeling image priors for inverse problems. We introduce \emph{Diff-Unfolding}, a principled framework for learning posterior score functions of \emph{conditional diffusion models} by explicitly…

Image and Video Processing · Electrical Eng. & Systems 2025-05-22 Yuanhao Wang , Shirin Shoushtari , Ulugbek S. Kamilov

The paradigm shift toward structure-driven molecule generation has been propelled by advances in deep generative models, such as variational auto-encoders and diffusion models. However, these generative models for molecular design remain…

Machine Learning · Computer Science 2026-04-17 Peidong Liu , Wenbo Zhang , Wei Ju , Jiancheng Lv , Xianggen Liu

Text-guided image editing model has achieved great success in general domain. However, directly applying these models to the fashion domain may encounter two issues: (1) Inaccurate localization of editing region; (2) Weak editing magnitude.…

Computer Vision and Pattern Recognition · Computer Science 2025-01-16 Zechao Zhan , Dehong Gao , Jinxia Zhang , Jiale Huang , Yang Hu , Xin Wang

While deep generative models show promise for learning inverse protein folding directly from data, the lack of publicly available structure-sequence pairings limits their generalization. Previous improvements and data augmentation efforts…

Artificial Intelligence · Computer Science 2024-07-23 Jiangbin Zheng , Stan Z. Li

Diffusion-based generative models have recently emerged as powerful solutions for high-quality synthesis in multiple domains. Leveraging the bidirectional Markov chains, diffusion probabilistic models generate samples by inferring the…

Computer Vision and Pattern Recognition · Computer Science 2023-03-29 Mengyi Zhao , Mengyuan Liu , Bin Ren , Shuling Dai , Nicu Sebe
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