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Digital Pathology is a cornerstone in the diagnosis and treatment of diseases. A key task in this field is the identification and segmentation of cells in hematoxylin and eosin-stained images. Existing methods for cell segmentation often…

Computer Vision and Pattern Recognition · Computer Science 2025-01-10 Fabian Hörst , Moritz Rempe , Helmut Becker , Lukas Heine , Julius Keyl , Jens Kleesiek

Sequential sensor data is generated in a wide variety of practical applications. A fundamental challenge involves learning effective classifiers for such sequential data. While deep learning has led to impressive performance gains in recent…

Machine Learning · Computer Science 2020-10-07 Nauman Ahad , Mark A. Davenport

Methods for object detection and segmentation rely on large scale instance-level annotations for training, which are difficult and time-consuming to collect. Efforts to alleviate this look at varying degrees and quality of supervision.…

Computer Vision and Pattern Recognition · Computer Science 2021-03-05 Siddhesh Khandelwal , Raghav Goyal , Leonid Sigal

Combining multiple object detection datasets offers a path to improved generalisation but is hindered by inconsistencies in class semantics and bounding box annotations. Some methods to address this assume shared label taxonomies and…

Computer Vision and Pattern Recognition · Computer Science 2025-06-09 Mikhail Kennerley , Angelica Aviles-Rivero , Carola-Bibiane Schönlieb , Robby T. Tan

The development of deep segmentation models for computational pathology (CPath) can help foster the investigation of interpretable morphological biomarkers. Yet, there is a major bottleneck in the success of such approaches because…

Gene annotation has traditionally required direct comparison of DNA sequences between an unknown gene and a database of known ones using string comparison methods. However, these methods do not provide useful information when a gene does…

Machine Learning · Computer Science 2019-09-17 James K. Senter , Taylor M. Royalty , Andrew D. Steen , Amir Sadovnik

Weakly supervised LiDAR semantic segmentation has made significant strides with limited labeled data. However, most existing methods focus on the network training under weak supervision, while efficient annotation strategies remain largely…

Computer Vision and Pattern Recognition · Computer Science 2024-08-13 Yilong Chen , Zongyi Xu , xiaoshui Huang , Ruicheng Zhang , Xinqi Jiang , Xinbo Gao

Cell detection is an essential task in cell image analysis. Recent deep learning-based detection methods have achieved very promising results. In general, these methods require exhaustively annotating the cells in an entire image. If some…

Computer Vision and Pattern Recognition · Computer Science 2021-07-22 Kazuma Fujii , Daiki Suehiro , Kazuya Nishimura , Ryoma Bise

Accurate cell type annotation across datasets is a key challenge in single-cell analysis. snRNA-seq enables profiling of frozen or difficult-to-dissociate tissues, complementing scRNA-seq by capturing fragile or rare cell types. However,…

Genomics · Quantitative Biology 2026-03-10 Xiran Chen , Quan Zou , Qinyu Cai , Xiaofeng Chen , Weikai Li , Yansu Wang

Semi-supervised multi-organ medical image segmentation aids physicians in improving disease diagnosis and treatment planning and reduces the time and effort required for organ annotation.Existing state-of-the-art methods train the labeled…

Computer Vision and Pattern Recognition · Computer Science 2024-09-04 Haochen Zhao , Hui Meng , Deqian Yang , Xiaozheng Xie , Xiaoze Wu , Qingfeng Li , Jianwei Niu

Large clinical datasets derived from insurance claims and electronic health record (EHR) systems are valuable sources for precision medicine research. These datasets can be used to develop models for personalized prediction of risk or…

Methodology · Statistics 2021-10-20 Liang Liang , Jue Hou , Hajime Uno , Kelly Cho , Yanyuan Ma , Tianxi Cai

Retinal image quality assessment (RIQA) supports computer-aided diagnosis of eye diseases. However, most tools classify only overall image quality, without indicating acquisition defects to guide recapture. This gap is mainly due to the…

Single-cell RNA sequencing (scRNA-seq) enables researchers to analyze gene expression at single-cell level. One important task in scRNA-seq data analysis is unsupervised clustering, which helps identify distinct cell types, laying down the…

Genomics · Quantitative Biology 2023-12-29 Weikang Jiang , Jinxian Wang , Jihong Guan , Shuigeng Zhou

Data annotation using visual inspection (supervision) of each training sample can be laborious. Interactive solutions alleviate this by helping experts propagate labels from a few supervised samples to unlabeled ones based solely on the…

Most approaches in few-shot learning rely on costly annotated data related to the goal task domain during (pre-)training. Recently, unsupervised meta-learning methods have exchanged the annotation requirement for a reduction in few-shot…

Machine Learning · Computer Science 2020-06-23 Carlos Medina , Arnout Devos , Matthias Grossglauser

Semi-supervised learning (SSL) has emerged as a promising paradigm in medical image segmentation, offering competitive performance while substantially reducing the need for extensive manual annotation. When combined with active learning…

Computer Vision and Pattern Recognition · Computer Science 2025-09-25 Yi Yang

Creating fully annotated labels for medical image segmentation is prohibitively time-intensive and costly, emphasizing the necessity for innovative approaches that minimize reliance on detailed annotations. Scribble annotations offer a more…

Computer Vision and Pattern Recognition · Computer Science 2024-12-30 Xiao Zhang , Shaoxuan Wu , Peilin Zhang , Zhuo Jin , Xiaosong Xiong , Qirong Bu , Jingkun Chen , Jun Feng

The pioneering method for unsupervised meta-learning, CACTUs, is a clustering-based approach with pseudo-labeling. This approach is model-agnostic and can be combined with supervised algorithms to learn from unlabeled data. However, it…

Machine Learning · Computer Science 2022-09-29 Xingping Dong , Jianbing Shen , Ling Shao

High-level Computer-Aided Process Planning (CAPP) generates manufacturing process plans from part specifications. It suffers from limited dataset availability in industry, reducing model generalization. We propose a semi-supervised learning…

We propose a meta-learning method for semi-supervised learning that learns from multiple tasks with heterogeneous attribute spaces. The existing semi-supervised meta-learning methods assume that all tasks share the same attribute space,…

Machine Learning · Computer Science 2023-11-10 Tomoharu Iwata , Atsutoshi Kumagai