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To improve efficiency, nearly all parallel processing units (CPUs and GPUs) implement relaxed memory models in which memory operations may be re-ordered, i.e., executed out-of-order. Prior testing work in this area found that memory…

Cryptography and Security · Computer Science 2026-01-14 Sean Siddens , Sanya Srivastava , Reese Levine , Josiah Dykstra , Tyler Sorensen

In this paper we describe an autotuning tool for optimization of OpenMP applications on highly multicore and multithreaded architectures. Our work was motivated by in-depth performance analysis of scientific applications and synthetic…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-01-17 Jakub Katarzyński , Maciej Cytowski

Btrim is a fast and lightweight software to trim adapters and low quality regions in reads from ultra high-throughput next-generation sequencing machines. It also can reliably identify barcodes and assign the reads to the original samples.…

Genomics · Quantitative Biology 2024-05-28 Yong Kong

Reducing the average memory access time is crucial for improving the performance of applications running on multi-core architectures. With workload consolidation this becomes increasingly challenging due to shared resource contention.…

Hardware Architecture · Computer Science 2021-02-24 Nadja Ramhöj Holtryd , Madhavan Manivannan , Per Stenström , Miquel Pericàs

Computed Tomography (CT) is a key 3D imaging technology that fundamentally relies on the compute-intense back-projection operation to generate 3D volumes. GPUs are typically used for back-projection in production CT devices. However, with…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-28 Peng Chen , Mohamed Wahib , Xiao Wang , Shinichiro Takizawa , Takahiro Hirofuchi , Hirotaka Ogawa , Satoshi Matsuoka

State-of-the-art systolic array-based accelerators adopt the traditional im2col algorithm to accelerate the inference of convolutional layers. However, traditional im2col cannot efficiently support AI backpropagation. Backpropagation in…

Hardware Architecture · Computer Science 2022-09-21 Jianchao Yang , Mei Wen , Junzhong Shen , Yasong Cao , Minjin Tang , Renyu Yang , Jiawei Fei , Chunyuan Zhang

The advent of ultra-low-bit LLM models (1/1.58/2-bit), which match the perplexity and end-task performance of their full-precision counterparts using the same model size, is ushering in a new era of LLM inference for resource-constrained…

Artificial Intelligence · Computer Science 2026-01-27 Evangelos Georganas , Dhiraj Kalamkar , Alexander Heinecke

Load-Dependent Branches (LDB) often do not exhibit regular patterns in their local or global history and thus are inherently hard to predict correctly by conventional branch predictors. We propose a software-to-hardware branch…

Hardware Architecture · Computer Science 2023-06-13 Maziar Goudarzi , Reza Azimi , Julian Humecki , Faizaan Rehman , Richard Zhang , Chirag Sethi , Tanishq Bomman , Yuqi Yang

In response to the increasingly critical demand for accurate prediction of GPU memory resources in deep learning tasks, this paper deeply analyzes the current research status and innovatively proposes a deep learning model that integrates…

Machine Learning · Computer Science 2025-10-27 Chao Wang , Zhizhao Wen , Ruoxin Zhang , Puyang Xu , Yifan Jiang

Recently, an ultra-low-cost linear scan based tomography architecture was proposed by our team. Similar to linear tomosynthesis, the source and detector are translated in opposite directions and the data acquisition system targets on a…

Medical Physics · Physics 2016-10-21 Weiwen Wu , Hengyong Yu , Shaoyu Wang , Fenglin Liu

Large-scale embedding-based retrieval (EBR) is the cornerstone of search-related industrial applications. Given a user query, the system of EBR aims to identify relevant information from a large corpus of documents that may be tens or…

Information Retrieval · Computer Science 2023-02-20 Yukang Gan , Yixiao Ge , Chang Zhou , Shupeng Su , Zhouchuan Xu , Xuyuan Xu , Quanchao Hui , Xiang Chen , Yexin Wang , Ying Shan

While frontier large language models (LLMs) continue to push capability boundaries, their deployment remains confined to GPU-powered cloud infrastructure. We challenge this paradigm with SmallThinker, a family of LLMs natively designed -…

Block Floating-Point (BFP) is emerging as an attractive data format for edge Neural Processing Units (NPUs), combining wide dynamic range with high hardware efficiency. However, its behavior under hardware faults and suitability for…

Hardware Architecture · Computer Science 2026-04-14 Jie Zhang , Jiapeng Guan , Hao Zhou , Xiaomeng Han , Tinglue Wang , Ran Wei , Zhe Jiang

This work focuses on the problem of hyper-parameter tuning (HPT) for robust (i.e., adversarially trained) models, shedding light on the new challenges and opportunities arising during the HPT process for robust models. To this end, we…

Machine Learning · Computer Science 2024-06-14 Pedro Mendes , Paolo Romano , David Garlan

Deep Neural Networks are vulnerable to Trojan (or backdoor) attacks. Reverse-engineering methods can reconstruct the trigger and thus identify affected models. Existing reverse-engineering methods only consider input space constraints,…

Cryptography and Security · Computer Science 2022-10-28 Zhenting Wang , Kai Mei , Hailun Ding , Juan Zhai , Shiqing Ma

Integer sorting on multicores and GPUs can be realized by a variety of approaches that include variants of distribution-based methods such as radix-sort, comparison-oriented algorithms such as deterministic regular sampling and random…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-08-31 Alexandros V. Gerbessiotis

Sequence alignment is a fundamental process in computational biology which identifies regions of similarity in biological sequences. With the exponential growth in the volume of data in bioinformatics databases, the time, processing power,…

Hardware Architecture · Computer Science 2025-07-31 Nasrin Akbari , Mehdi Modarressi , Alireza Khadem

The performance of today's in-memory indexes is bottlenecked by the memory latency/bandwidth wall. Processing-in-memory (PIM) is an emerging approach that potentially mitigates this bottleneck, by enabling low-latency memory access whose…

Large language model (LLM) inference is limited by high computational cost and memory bandwidth demands, making deployment on heterogeneous many-core processors challenging. Taking the MT-3000 processor used in the Tianhe supercomputer as…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-26 Yao Lu , Zhongzhi Luan , Gen Li , Jiaxing Qi , Shiqing Ma , Bin Han , Shizhe Shang , Hailong Yang , Depei Qian

Massive multi-threading in GPU imposes tremendous pressure on memory subsystems. Due to rapid growth in thread-level parallelism of GPU and slowly improved peak memory bandwidth, the memory becomes a bottleneck of GPU's performance and…

Hardware Architecture · Computer Science 2019-06-17 Bing Li , Mengjie Mao , Xiaoxiao Liu , Tao Liu , Zihao Liu , Wujie Wen , Yiran Chen , Hai , Li
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