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In data-driven drug discovery, designing molecular descriptors is a very important task. Deep generative models such as variational autoencoders (VAEs) offer a potential solution by designing descriptors as probabilistic latent vectors…

Machine Learning · Computer Science 2023-08-23 Daiki Koge , Naoaki Ono , Shigehiko Kanaya

We present a variational autoencoder framework for learning and generating configurations of structured polymer globules from distance matrices. We used coarse-grained molecular dynamics to sample polyethylene structures, which we used as…

Learning low-dimensional representations of single-cell transcriptomics has become instrumental to its downstream analysis. The state of the art is currently represented by neural network models such as variational autoencoders (VAEs) which…

Machine Learning · Computer Science 2024-02-01 Viktoria Schuster , Anders Krogh

Generating synthetic tabular data is critical in machine learning, especially when real data is limited or sensitive. Traditional generative models often face challenges due to the unique characteristics of tabular data, such as mixed data…

Machine Learning · Computer Science 2024-10-30 Vitaliy Kinakh , Slava Voloshynovskiy

Variational Autoencoders and their many variants have displayed impressive ability to perform dimensionality reduction, often achieving state-of-the-art performance. Many current methods however, struggle to learn good representations in…

Machine Learning · Computer Science 2023-06-28 Navindu Leelarathna , Andrei Margeloiu , Mateja Jamnik , Nikola Simidjievski

Tabular foundation models aim to learn universal representations of tabular data that transfer across tasks and domains, enabling applications such as table retrieval, semantic search and table-based prediction. Despite the growing number…

Machine Learning · Computer Science 2026-04-24 Liane Vogel , Kavitha Srinivas , Niharika D'Souza , Sola Shirai , Oktie Hassanzadeh , Horst Samulowitz

Recent work on deep learning for tabular data demonstrates the strong performance of deep tabular models, often bridging the gap between gradient boosted decision trees and neural networks. Accuracy aside, a major advantage of neural models…

This study addresses the challenge of accurately identifying multi-task contention types in high-dimensional system environments and proposes a unified contention classification framework that integrates representation transformation,…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-29 Xiao Yang , Yinan Ni , Yuqi Tang , Zhimin Qiu , Chen Wang , Tingzhou Yuan

The field of imbalanced self-supervised learning, especially in the context of tabular data, has not been extensively studied. Existing research has predominantly focused on image datasets. This paper aims to fill this gap by examining the…

Machine Learning · Computer Science 2024-03-26 Samuel Stocksieker , Denys Pommeret , Arthur Charpentier

Representation learning stands as one of the critical machine learning techniques across various domains. Through the acquisition of high-quality features, pre-trained embeddings significantly reduce input space redundancy, benefiting…

Machine Learning · Computer Science 2023-12-19 Suiyao Chen , Jing Wu , Naira Hovakimyan , Handong Yao

Tabular data is one of the most ubiquitous modalities, yet the literature on tabular generative foundation models is lagging far behind its text and vision counterparts. Creating such a model is hard, due to the heterogeneous feature spaces…

Machine Learning · Computer Science 2024-06-26 Boris van Breugel , Jonathan Crabbé , Rob Davis , Mihaela van der Schaar

High-performance deep learning depends on efficient tensor programs. In recent years, automatic tensor program optimization, also known as tensor compilation, has emerged as the primary approach to generating efficient tensor programs.…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-18 Hangda Liu , Boyu Diao , Yu Yang , Wenxin Chen , Xiaohui Peng , Yongjun Xu

Autoencoders exhibit impressive abilities to embed the data manifold into a low-dimensional latent space, making them a staple of representation learning methods. However, without explicit supervision, which is often unavailable, the…

Machine Learning · Computer Science 2023-01-12 Felix Leeb , Stefan Bauer , Michel Besserve , Bernhard Schölkopf

Learning features from data is one of the defining characteristics of deep learning, but our theoretical understanding of the role features play in deep learning is still rudimentary. To address this gap, we introduce a new tool, the…

Machine Learning · Computer Science 2023-06-09 Yiding Jiang , Christina Baek , J. Zico Kolter

Traditional machine learning assumes samples in tabular data to be independent and identically distributed (i.i.d). This assumption may miss useful information within and between sample relationships in representation learning. This paper…

Machine Learning · Computer Science 2023-06-13 Shourav B. Rabbani , Manar D. Samad

Handling imbalance in class distribution when building a classifier over tabular data has been a problem of long-standing interest. One popular approach is augmenting the training dataset with synthetically generated data. While classical…

Machine Learning · Computer Science 2025-02-20 Annie D'souza , Swetha M , Sunita Sarawagi

Deep generative models have significantly advanced medical imaging analysis by enhancing dataset size and quality. Beyond mere data augmentation, our research in this paper highlights an additional, significant capacity of deep generative…

Computer Vision and Pattern Recognition · Computer Science 2024-10-18 Xiaodan Xing , Junzhi Ning , Yang Nan , Guang Yang

Deep networks can be trained to map images into a low-dimensional latent space. In many cases, different images in a collection are articulated versions of one another; for example, same object with different lighting, background, or pose.…

Computer Vision and Pattern Recognition · Computer Science 2023-03-14 Rakib Hyder , M. Salman Asif

Learning interpretable latent representations from tabular data remains a challenge in deep generative modeling. We introduce SE-VAE (Structural Equation-Variational Autoencoder), a novel architecture that embeds measurement structure…

Machine Learning · Computer Science 2025-08-19 Ruiyu Zhang , Ce Zhao , Xin Zhao , Lin Nie , Wai-Fung Lam

Representation learning seeks to expose certain aspects of observed data in a learned representation that's amenable to downstream tasks like classification. For instance, a good representation for 2D images might be one that describes only…

Machine Learning · Computer Science 2017-03-07 Xi Chen , Diederik P. Kingma , Tim Salimans , Yan Duan , Prafulla Dhariwal , John Schulman , Ilya Sutskever , Pieter Abbeel