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Network alignment (NA) aims to find a node mapping between molecular networks of different species that identifies topologically or functionally similar network regions. Analogous to genomic sequence alignment, NA can be used to transfer…

Molecular Networks · Quantitative Biology 2016-04-07 Vipin Vijayan , Tijana Milenkovic

In science and engineering, intelligent processing of complex signals such as images, sound or language is often performed by a parameterized hierarchy of nonlinear processing layers, sometimes biologically inspired. Hierarchical systems…

Machine Learning · Computer Science 2012-12-27 Miguel Á. Carreira-Perpiñán , Weiran Wang

Spiking neural networks (SNNs) are biologically inspired, event-driven models suited for temporal data processing and energy-efficient neuromorphic computing. In SNNs, richer neuronal dynamic allows capturing more complex temporal…

Machine Learning · Computer Science 2026-03-27 Sanja Karilanova , Subhrakanti Dey , Ayça Özçelikkale

To fully understand, analyze, and determine the behavior of dynamical systems, it is crucial to identify their intrinsic modal coordinates. In nonlinear dynamical systems, this task is challenging as the modal transformation based on the…

Machine Learning · Computer Science 2025-03-13 Abdolvahhab Rostamijavanani , Shanwu Li , Yongchao Yang

Spatiotemporal metasurfaces offer unique opportunities for wave manipulation, however, their practical realization is often constrained by the requirement for in-plane spatial modulation, which necessitates a large number of time-varying…

Physical reservoir computing is a framework for brain-inspired information processing that utilizes nonlinear and high-dimensional dynamics in non-von-Neumann systems. In recent years, spintronic devices have been proposed for use as…

Mesoscale and Nanoscale Physics · Physics 2023-10-11 Kaito Kobayashi , Yukitoshi Motome

The synapses of real neural systems seem to have delays. Therefore, it is worthwhile to analyze associative memory models with delayed synapses. Thus, a sequential associative memory model with delayed synapses is discussed, where a…

Disordered Systems and Neural Networks · Physics 2007-05-23 Seiji Miyoshi , Hiro-Fumi Yanai , Masato Okada

Deep Neural Networks (DNNs) have the potential for making various clinical procedures more time-efficient by automating medical image segmentation. Due to their strong, in some cases human-level, performance, they have become the standard…

Image and Video Processing · Electrical Eng. & Systems 2022-02-24 Martijn M. A. Bosma , Arkadiy Dushatskiy , Monika Grewal , Tanja Alderliesten , Peter A. N. Bosman

Neural architecture search (NAS) has recently been addressed from various directions, including discrete, sampling-based methods and efficient differentiable approaches. While the former are notoriously expensive, the latter suffer from…

Machine Learning · Computer Science 2021-05-13 Jovita Lukasik , David Friede , Arber Zela , Frank Hutter , Margret Keuper

The incompressible magnetohydrodynamic (MHD) equations are fundamental in many scientific and engineering applications. However, their strong nonlinearity and dual divergence-free constraints make them highly challenging for conventional…

Fluid Dynamics · Physics 2026-03-03 Yunlong Li , Fei Wang , Lingxiao Li

DNA is a promising medium for digital information storage for its exceptional density and durability. While prior studies advanced coding theory, workflow design, and simulation tools, challenges such as synthesis costs, sequencing errors,…

Emerging Technologies · Computer Science 2025-10-06 Rakesh Thakur , Lavanya Singh , Yashika , Manomay Bundawala , Aruna Kumar

Reservoir computing is a bio-inspired machine learning paradigm that exploits the intrinsic dynamics of nonlinear systems with fading memory for efficient temporal information processing. Microelectromechanical resonators offer a promising…

Networks found with Neural Architecture Search (NAS) achieve state-of-the-art performance in a variety of tasks, out-performing human-designed networks. However, most NAS methods heavily rely on human-defined assumptions that constrain the…

Computer Vision and Pattern Recognition · Computer Science 2023-01-10 Vasco Lopes , Luís A. Alexandre

Real-time analysis and classification of bio-signals measured using wearable devices is computationally costly and requires dedicated low-power hardware. One promising approach is to use spiking neural networks implemented using in-memory…

Signal Processing · Electrical Eng. & Systems 2022-09-07 Stefan Gerber , Marc Steiner , Maryada , Giacomo Indiveri , Elisa Donati

Delay-based reservoir computing has gained a lot of attention due to the relative simplicity with which this concept can be implemented in hardware. However,there is still an misconception about the relationship between the delay-time and…

Computational Physics · Physics 2021-12-23 Tobias Hülser , Felix Köster , Lina Jaurigue , Kathy Lüdge

As an efficient recurrent neural network (RNN) model, reservoir computing (RC) models, such as Echo State Networks, have attracted widespread attention in the last decade. However, while they have had great success with time series data…

Machine Learning · Computer Science 2017-11-16 Qianli Ma , Lifeng Shen , Garrison W. Cottrell

For nanostructured materials, strain is of fundamental importance in stabilizing a specific crystallographic phase, modifying electronic properties, and in consequence their magnetism when it applies. Here we describe a magnetic shape…

Mesoscale and Nanoscale Physics · Physics 2010-10-07 C. Echeverría-Arrondo , J. Pérez-Conde , A. Ayuela

Neural Ordinary Differential Equations (NODEs), a framework of continuous-depth neural networks, have been widely applied, showing exceptional efficacy in coping with some representative datasets. Recently, an augmented framework has been…

Machine Learning · Computer Science 2021-02-23 Qunxi Zhu , Yao Guo , Wei Lin

A cascaded phase-only mask architecture (or an optical diffractive neural network) can be employed for different optical information processing tasks such as pattern recognition, orbital angular momentum (OAM) mode conversion, image…

Computer Vision and Pattern Recognition · Computer Science 2020-02-26 Yang Gao , Shuming Jiao , Juncheng Fang , Ting Lei , Zhenwei Xie , Xiaocong Yuan

Graph-based neural networks and, specifically, message-passing neural networks (MPNNs) have shown great potential in predicting physical properties of solids. In this work, we train an MPNN to first classify materials through density…

Computational Physics · Physics 2023-09-13 Tim Bechtel , Daniel T. Speckhard , Jonathan Godwin , Claudia Draxl