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Stanford Medicine is building a new data platform for our academic research community to do better clinical data science. Hospitals have a large amount of patient data and researchers have demonstrated the ability to reuse that data and AI…
Mobile crowdsensing takes advantage of pervasive mobile devices to collect and process data for a variety of applications (e.g., traffic monitoring, spectrum sensing). In this study, a socially-aware crowdsensing system is advocated, in…
We present STAR: a novel system aimed at solving the complex issue of "p-hacking" and false discoveries in scientific studies. STAR provides a concrete way for ensuring the application of false discovery control procedures in hypothesis…
The Safe Trusted Autonomy for Responsible Space (STARS) program aims to advance autonomy technologies for space by leveraging machine learning technologies while mitigating barriers to trust, such as uncertainty, opaqueness, brittleness,…
Objective: To (1) demonstrate the implementation of a data science platform built on open-source technology within a large, academic healthcare system and (2) describe two computational healthcare applications built on such a platform.…
We describe the current state and future plans for a set of tools for scientific data management (SDM) designed to support scientific transparency and reproducible research. SDM has been in active use at our MRI Center for more than two…
Research papers in the biomedical field come with large and complex data sets that are shared with the scientific community as unstructured data files via public data repositories. Examples are sequencing, microarray, and mass spectroscopy…
Clinical 12-lead ECG classification remains difficult because of diverse recording conditions, overlapping pathologies, and pronounced label imbalance hinder generalization, while unconstrained augmentations risk distorting diagnostically…
SMART is an open source web application designed to help data scientists and research teams efficiently build labeled training data sets for supervised machine learning tasks. SMART provides users with an intuitive interface for creating…
The review and analysis of large collections of documents and the periodic monitoring of new additions thereto has greatly benefited from new developments in computer software. This paper demonstrates how using random vectors to construct a…
Threshold aggregation reporting systems promise a practical, privacy-preserving solution for developers to learn how their applications are used "\emph{in-the-wild}". Unfortunately, proposed systems to date prove impractical for wide scale…
Involving users in early phases of software development has become a common strategy as it enables developers to consider user needs from the beginning. Once a system is in production, new opportunities to observe, evaluate and learn from…
Traditional Smooth Transition Autoregressive (STAR) models offer an effective way to model these dynamics through smooth regime changes based on specific transition variables. In this paper, we propose a novel approach by drawing an analogy…
I/O performance is crucial to efficiency in data-intensive scientific computing; but tuning large-scale storage systems is complex, costly, and notoriously manpower-intensive, making it inaccessible for most domain scientists. To address…
Clinical decision support systems are software tools that help clinicians to make medical decisions. However, their acceptance by clinicians is usually rather low. A known problem is that they often require clinicians to manually enter lots…
This manuscript explores linking real-world patient data with external death data in the context of research Clinical Data Warehouses (r-CDWs). We specifically present the linking of Electronic Health Records (EHR) data for Stanford Health…
The increasing reliance on Large Language Models (LLMs) across diverse sectors highlights the need for robust domain-specific and language-specific evaluation datasets; however, the collection of such datasets is challenging due to privacy…
A quick look at research and development in astronomy shows that we live in exciting times. Exoplanetary systems, supernovae, and merging binary black holes were far out of reach for observers two decades ago and now such phenomena are…
The increasing adoption of digital health technologies has amplified the need for robust, interoperable solutions to manage complex healthcare data. We present the Spezi Data Pipeline, an open-source Python toolkit designed to streamline…
Healthcare data contains some of the most sensitive information about an individual, yet sharing this data with healthcare practitioners can significantly enhance patient care and support research efforts. However, current systems for…