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This article aims to study the topological invariant properties encoded in node graph representational embeddings by utilizing tools available in persistent homology. Specifically, given a node embedding representation algorithm, we…

Machine Learning · Computer Science 2021-10-12 Mustafa Hajij , Ghada Zamzmi , Xuanting Cai

Multi-parameter persistent homology is a recent branch of topological data analysis. In this area, data sets are investigated through the lens of homology with respect to two or more scale parameters. The high computational cost of many…

Algebraic Topology · Mathematics 2020-10-30 Michael Kerber , Alexander Rolle

The theory of persistence modules on the commutative ladders $CL_n(\tau)$ provides an extension of persistent homology. However, an efficient algorithm to compute the generalized persistence diagrams is still lacking. In this work, we view…

Representation Theory · Mathematics 2018-09-26 Hideto Asashiba , Emerson G. Escolar , Yasuaki Hiraoka , Hiroshi Takeuchi

Persistence diagrams, combining geometry and topology for an effective shape description used in pattern recognition, have already proven to be an effective tool for shape representation with respect to a certainfiltering function.…

Algebraic Topology · Mathematics 2018-12-26 Alessia Angeli , Massimo Ferri , Ivan Tomba

Persistence diagrams, which summarize the birth and death of homological features extracted from data, are employed as stable signatures for applications in image analysis and other areas. Besides simply considering the multiset of…

Computational Geometry · Computer Science 2018-10-16 Tamal K. Dey , Tao Hou , Sayan Mandal

Persistence diagrams have been widely used to quantify the underlying features of filtered topological spaces in data visualization. In many applications, computing distances between diagrams is essential; however, computing these distances…

Computational Geometry · Computer Science 2021-08-12 Yu Qin , Brittany Terese Fasy , Carola Wenk , Brian Summa

Persistent (co)homology is a central construction in topological data analysis, where it is used to quantify prominence of features in data to produce stable descriptors suitable for downstream analysis. Persistence is challenging to…

Computational Geometry · Computer Science 2024-10-23 Arnur Nigmetov , Dmitriy Morozov

Stratified digraphs are popular models for feedforward neural networks. However, computation of their path homologies has been limited to low dimensions due to high computational complexity. A recursive algorithm is proposed to compute…

Computational Geometry · Computer Science 2024-12-12 Zhengtong Zhu , Zhiyi Chi

In this note one shows that the four persistence diagrams and measures defined in [5] are particular cases of the maps and the measures discussed in [2] and [1]

Algebraic Topology · Mathematics 2019-04-16 Dan Burghelea

The persistent homology with coefficients in a field F coincides with the same for cohomology because of duality. We propose an implementation of a recently introduced algorithm for persistent cohomology that attaches annotation vectors…

Computational Geometry · Computer Science 2020-01-09 Jean-Daniel Boissonnat , Tamal K. Dey , Clément Maria

Computing persistence over changing filtrations give rise to a stack of 2D persistence diagrams where the birth-death points are connected by the so-called `vines'. We consider computing these vines over changing filtrations for zigzag…

Computational Geometry · Computer Science 2022-08-03 Tamal K. Dey , Tao Hou

This article studies the robust version of persistent homology based on trimming methodology to capture the geometric feature through support of the data in presence of outliers. Precisely speaking, the proposed methodology works when the…

Methodology · Statistics 2026-01-01 Tuhin Subhra Mahato , Subhra Sankar Dhar

Persistent homology is a tool that can be employed to summarize the shape of data by quantifying homological features. When the data is an object in $\mathbb{R}^d$, the (augmented) persistent homology transform ((A)PHT) is a family of…

Computational Geometry · Computer Science 2022-12-27 Brittany Terese Fasy , Samuel Micka , David L. Millman , Anna Schenfisch , Lucia Williams

Persistent homology is an important methodology in topological data analysis which adapts theory from algebraic topology to data settings. Computing persistent homology produces persistence diagrams, which have been successfully used in…

Machine Learning · Statistics 2026-01-13 Yueqi Cao , Anthea Monod

The persistent homology pipeline includes the reduction of a, so-called, boundary matrix. We extend the work of Bauer et al. (2014) and Chen et al. (2011) where they show how to use dependencies in the boundary matrix to adapt the reduction…

Algebraic Topology · Mathematics 2017-08-17 Rodrigo Mendoza-Smith , Jared Tanner

Persistent homology is a popular data analysis technique that is used to capture the changing topology of a filtration associated with some simplicial complex $K$. These topological changes are summarized in persistence diagrams. We propose…

Computational Geometry · Computer Science 2018-10-11 Tamal K. Dey , Ryan Slechta

Persistent homology is a fundamental tool in Topological Data Analysis. The associated algebraic structure is the persistence module, a sequence of vector spaces connected by linear maps. Persistence modules admit a complete and…

Algebraic Topology · Mathematics 2026-02-13 R. Gonzalez-Diaz , M. Soriano-Trigueros , A. Torras-Casas

Persistent homology is a leading tool in topological data analysis (TDA). Many problems in TDA can be solved via homological -- and indeed, linear -- algebra. However, matrices in this domain are typically large, with rows and columns…

Algebraic Topology · Mathematics 2021-08-23 Haibin Hang , Chad Giusti , Lori Ziegelmeier , Gregory Henselman-Petrusek

We propose a general technique for extracting a larger set of stable information from persistent homology computations than is currently done. The persistent homology algorithm is usually viewed as a procedure which starts with a filtered…

Computational Geometry · Computer Science 2021-01-29 Paul Bendich , Peter Bubenik , Alexander Wagner

This paper develops the idea of homology for 1-parameter families of topological spaces. We express parametrized homology as a collection of real intervals with each corresponding to a homological feature supported over that interval or,…

Algebraic Topology · Mathematics 2019-03-20 Gunnar Carlsson , Vin de Silva , Sara Kalisnik , Dmitriy Morozov