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Biological systems are known to communicate by diffusing chemical signals in the surrounding medium. However, most of the recent literature has neglected the electron transfer mechanism occurring amongst living cells, and its role in…

Emerging Technologies · Computer Science 2015-02-23 Nicolo Michelusi , Sahand Pirbadian , Mohamed Y. El-Naggar , Urbashi Mitra

Electrical signals play the primary role in rapid communication among organs, tissues and cells in biosystems. We have analyzed and discussed three phenomena of electrical communication in biosystems, including direction-changing movement…

Biological Physics · Physics 2017-08-11 Jingjing Xu , Fan Yang , Danhong Han , Shengyong Xu

Cells must continuously sense and respond to time-varying environmental stimuli. These signals are transmitted and processed by biochemical signalling networks. However, the biochemical reactions making up these networks are intrinsically…

Molecular Networks · Quantitative Biology 2015-05-18 Filipe Tostevin , Pieter Rein ten Wolde

Cells receive signaling molecules by receptors and relay information via sensory networks so that they can respond properly depending on the type of signal. Recent studies have shown that cells can extract multi-dimensional information from…

Biological Physics · Physics 2018-02-14 Yoshihiko Hasegawa

Individuals, despite having varied life experiences and learning processes, can communicate effectively through languages. This study aims to explore the efficiency of language as a communication medium. We put forth two specific…

Machine Learning · Computer Science 2024-10-21 Hang Chen , Yuchuan Jang , Weijie Zhou , Cristian Meo , Ziwei Chen , Dianbo Liu

With much advancement in the field of nanotechnology, bioengineering and synthetic biology over the past decade, microscales and nanoscales devices are becoming a reality. Yet the problem of engineering a reliable communication system…

Emerging Technologies · Computer Science 2016-11-15 Nariman Farsad , H. Birkan Yilmaz , Andrew Eckford , Chan-Byoung Chae , Weisi Guo

Molecular data systems have the potential to store information at dramatically higher density than existing electronic media. Some of the first experimental demonstrations of this idea have used DNA, but nature also uses a wide diversity of…

In recent years it is increasingly being recognized that biochemical signals are not necessarily constant in time and that the temporal dynamics of a signal can be the information carrier. Moreover, it is now well established that…

Molecular Networks · Quantitative Biology 2015-06-17 Wiet de Ronde , Pieter Rein ten Wolde

In this paper, we perform receiver design for a diffusive molecular communication environment. Our model includes flow in any direction, sources of information molecules in addition to the transmitter, and enzymes in the propagation…

Information Theory · Computer Science 2014-10-17 Adam Noel , Karen C. Cheung , Robert Schober

Molecular Communication as the most potential methods to solve the communication in nano scale, for it's derived from nature, and it becomes more and more prevalent. Though molecular communication happens in three dimensional situation,…

Emerging Technologies · Computer Science 2016-03-14 Pengfei Lu , Zhenqiang Wu

Energy-efficient communication is an important requirement for mobile devices, as the battery technology has not kept up with the growing requirements stemming from ubiquitous multimedia applications. This paper considers energy-efficient…

Information Theory · Computer Science 2012-03-06 Wei Yang , Lihua Li , Ying Wang , Wanlu Sun

Maximizing the speed and precision of communication while minimizing power dissipation is a fundamental engineering design goal. Also, biological systems achieve remarkable speed, precision and power efficiency using poorly understood…

Statistical Mechanics · Physics 2016-03-30 Subhaneil Lahiri , Jascha Sohl-Dickstein , Surya Ganguli

Bacterial second messengers are crucial for transmitting environmental information to cellular responses. However, quantifying their information transmission capacity remains challenging. Here, we engineer an isolated cAMP signaling channel…

Biological Physics · Physics 2024-08-12 Jiarui Xiong , Liang Wang , Jialun Lin , Lei Ni , Rongrong Zhang , Shuai Yang , Yajia Huang , Jun Chu , Fan Jin

In recent years, progresses in nanotechnology have established the foundations for implementing nanomachines capable of carrying out simple but significant tasks. Under this stimulus, researchers have been proposing various solutions for…

Emerging Technologies · Computer Science 2018-08-14 Luca Felicetti , Mauro Femminella , Gianluca Reali , Pietro Liò

We provide a fundamental treatment of the molecular communication channel wherein "inscribed matter" is transmitted across a spatial gap to provide reliable signaling between a sender and receiver. Inscribed matter is defined as an ensemble…

Emerging Technologies · Computer Science 2020-09-22 Christopher Rose , Ismat Saira Mian

A diffusion-based molecular communication system has two major components: the diffusion in the medium, and the ligand-reception. Information bits, encoded in the time variations of the concentration of molecules, are conveyed to the…

Information Theory · Computer Science 2012-05-23 Arash Einolghozati , Mohsen Sardari , Faramarz Fekri

Motivated by recent discoveries of microbial communities that transfer electrons across centimeter-length scales, this paper studies the information capacity of bacterial cables via electron transfer, which coexists with molecular…

Information Theory · Computer Science 2015-01-19 Nicolo Michelusi , Urbashi Mitra

Central to the functioning of a living cell is its ability to control the readout or expression of information encoded in the genome. In many cases, a single transcription factor protein activates or represses the expression of many genes.…

Molecular Networks · Quantitative Biology 2013-05-29 Aleksandra M. Walczak , Gapser Tkacik , William Bialek

Molecular communication (MC) offers a groundbreaking approach to communication inspired by biological signaling. It is particularly suited for environments where traditional electromagnetic methods fail, such as fluid mediums or within the…

Molecular Networks · Quantitative Biology 2025-03-18 Aravind Muraleedharan , Abhishek K. Gupta

Eukaryotic cell development has been optimized by natural selection to obey maximal intracellular flux of messenger proteins. This, in turn, implies maximum Fisher information on angular position about a target nuclear pore complex (NPR).…

Subcellular Processes · Quantitative Biology 2014-05-01 B. R. Frieden , R. A. Gatenby