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Computational biology has increasingly turned to agent-based modeling to explore complex biological systems. Biological diffusion (diffusion, decay, secretion, and uptake) is a key driver of biological tissues. GPU computing can vastly…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-27 Matt Stack , Paul Macklin , Robert Searles , Sunita Chandrasekaran

The MURaM (Max Planck University of Chicago Radiative MHD) code is a solar atmosphere radiative MHD model that has been broadly applied to solar phenomena ranging from quiet to active sun, including eruptive events such as flares and…

To cope with the unprecedented surge in demand for data computing for the applications, the promising concept of multi-access edge computing (MEC) has been proposed to enable the network edges to provide closer data processing for mobile…

Information Theory · Computer Science 2020-08-14 Qiqi Ren , Jian Chen , Omid Abbasi , Gunes Karabulut Kurt , Halim Yanikomeroglu , F. Richard Yu

Object-oriented programming (OOP) has long been regarded as too inefficient for SIMD high-performance computing, despite the fact that many important HPC applications have an inherent object structure. We discovered a broad subset of OOP…

Programming Languages · Computer Science 2019-05-30 Matthias Springer

Heterogeneity has become a mainstream architecture design choice for building High Performance Computing systems. However, heterogeneity poses significant challenges for achieving performance portability of execution. Adapting a program to…

Programming Languages · Computer Science 2023-03-17 Giorgis Georgakoudis , Konstantinos Parasyris , Chunhua Liao , David Beckingsale , Todd Gamblin , Bronis de Supinski

An increasingly large number of HPC systems rely on heterogeneous architectures combining traditional multi-core CPUs with power efficient accelerators. Designing efficient applications for these systems has been troublesome in the past as…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-03-02 E. Calore , A. Gabbana , J. Kraus , S. F. Schifano , R. Tripiccione

Despite the various research initiatives and proposed programming models, efficient solutions for parallel programming in HPC clusters still rely on a complex combination of different programming models (e.g., OpenMP and MPI), languages…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-16 Hervé Yviquel , Marcio Pereira , Emílio Francesquini , Guilherme Valarini , Gustavo Leite , Pedro Rosso , Rodrigo Ceccato , Carla Cusihualpa , Vitoria Dias , Sandro Rigo , Alan Souza , Guido Araujo

When considering different hardware platforms, not just the time-to-solution can be of importance but also the energy necessary to reach it. This is not only the case with battery powered and mobile devices but also with high-performance…

Performance · Computer Science 2020-06-30 Philip Heinisch , Katharina Ostaszewski , Hendrik Ranocha

This paper presents a comparison of OpenMP and OpenCL based on the parallel implementation of algorithms from various fields of computer applications. The focus of our study is on the performance of benchmark comparing OpenMP and OpenCL. We…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-11-12 Krishnahari Thouti , S. R. Sathe

Using GPUs as general-purpose processors has revolutionized parallel computing by offering, for a large and growing set of algorithms, massive data-parallelization on desktop machines. An obstacle to widespread adoption, however, is the…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-10-14 Alexey Kolesnichenko , Christopher M. Poskitt , Sebastian Nanz , Bertrand Meyer

To effectively control large-scale distributed systems online, model predictive control (MPC) has to swiftly solve the underlying high-dimensional optimization. There are multiple techniques applied to accelerate the solving process in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-30 Carmen Amo Alonso , Shih-Hao Tseng

This document is one of the deliverable reports created for the ESCAPE project. ESCAPE stands for Energy-efficient Scalable Algorithms for Weather Prediction at Exascale. The project develops world-class, extreme-scale computing…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-08-20 Alastair McKinstry

Large Language Models (LLMs) have achieved impressive results across various tasks, yet their high computational demands pose deployment challenges, especially on consumer-grade hardware. Mixture of Experts (MoE) models provide an efficient…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-19 En-Ming Huang , Li-Shang Lin , Chun-Yi Lee

The aim of parallel computing is to increase an application performance by executing the application on multiple processors. OpenMP is an API that supports multi platform shared memory programming model and shared-memory programs are…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-11-12 Vibha Rajput , Alok Katiyar

The ability to scale out training workloads has been one of the key performance enablers of deep learning. The main scaling approach is data-parallel GPU-based training, which has been boosted by hardware and software support for highly…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-01-02 Ilia Markov , Hamidreza Ramezanikebrya , Dan Alistarh

As large language models (LLMs) scale out with tensor parallelism (TP) and pipeline parallelism (PP) and production stacks have aggressively optimized the data plane (attention/GEMM and KV cache), sampling, the decision plane that turns…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-02 Bohan Zhao , Zane Cao , Yongchao He

We present the implementation and performance of a class of directionally unsplit Riemann-solver-based hydrodynamic schemes on Graphic Processing Units (GPU). These schemes, including the MUSCL-Hancock method, a variant of the MUSCL-Hancock…

Instrumentation and Methods for Astrophysics · Physics 2011-09-05 Hsi-Yu Schive , Ui-Han Zhang , Tzihong Chiueh

Efficiently exploiting GPUs is increasingly essential in scientific computing, as many current and upcoming supercomputers are built using them. To facilitate this, there are a number of programming approaches, such as CUDA, OpenACC and…

Performance · Computer Science 2017-11-07 G. D. Balogh , I. Z. Reguly , G. R. Mudalige

This study systematically tests a computational power reuse scheme proposed by the open source community disabling specific instruction sets (Fused Multiply Add instructions) through CUDA source code modifications on the NVIDIA CMP 170HX…

Hardware Architecture · Computer Science 2025-05-09 Xing Kangwei

Gain Cell memory (GCRAM) offers higher density and lower power than SRAM, making it a promising candidate for on-chip memory in domain-specific accelerators. To support workloads with varying traffic and lifetime metrics, GCRAM also offers…

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