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Open-source matters, not just to the current cohort of HPC users but also to potential new HPC communities, such as machine learning, themselves often rooted in open-source. Many of these potential new workloads are, by their very nature,…

The Message Passing Interface (MPI) is the prevalent programming model used on today's supercomputers. Therefore, MPI library developers are looking for the best possible performance (shortest run-time) of individual MPI functions across…

The implicit 2D3V particle-in-cell (PIC) code developed to study the interaction of ultrashort pulse lasers with matter [G. M. Petrov and J. Davis, Computer Phys. Comm. 179, 868 (2008); Phys. Plasmas 18, 073102 (2011)] has been parallelized…

We present a simple and easy to apply methodology for using high-level self-submitting parallel job queues in an MPI environment. Using C++, we implemented a library of functions, MPQueue, both for testing our concepts and for use in real…

Hybrid MPI+threads programming is gaining prominence, but, in practice, applications perform slower with it compared to the MPI everywhere model. The most critical challenge to the parallel efficiency of MPI+threads applications is slow…

High-Performance Computing (HPC) systems are the most powerful tools that we currently have to solve complex scientific simulations. Quantum computing (QC) has the potential to enhance HPC systems by accelerating the execution of specific…

A modern GPU aims to simultaneously execute more warps for higher Thread-Level Parallelism (TLP) and performance. When generating many memory requests, however, warps contend for limited cache space and thrash cache, which in turn severely…

We consider the problem of sampling $n$ numbers from the range $\{1,\ldots,N\}$ without replacement on modern architectures. The main result is a simple divide-and-conquer scheme that makes sequential algorithms more cache efficient and…

We present DIO, a generic tool for observing inefficient and erroneous I/O interactions between applications and in-kernel storage systems that lead to performance, dependability, and correctness issues. DIO facilitates the analysis and…

Asymmetric multicore processors (AMPs) couple high-performance big cores and low-power small cores with the same instruction-set architecture but different features, such as clock frequency or microarchitecture. Previous work has shown that…

Maintaining a dynamic $k$-core decomposition is an important problem that identifies dense subgraphs in dynamically changing graphs. Recent work by Liu et al. [SPAA 2022] presents a parallel batch-dynamic algorithm for maintaining an…

Task-based programming models have proven to be a robust and versatile way to approach development of applications for distributed environments. They provide natural programming patterns with high performance. However, execution on this…

Many-core accelerators, as represented by the XeonPhi coprocessors and GPGPUs, allow software to exploit spatial and temporal sharing of computing resources to improve the overall system performance. To unlock this performance potential…

R has become a cornerstone of scientific and statistical computing due to its extensive package ecosystem, expressive syntax, and strong support for reproducible analysis. However, as data sizes and computational demands grow, native R…

Recent advances in computing architectures and networking are bringing parallel computing systems to the masses so increasing the number of potential users of these kinds of systems. In particular, two important technological evolutions are…

MPI+threads is gaining prominence as an alternative to the traditional MPI everywhere model in order to better handle the disproportionate increase in the number of cores compared with other on-node resources. However, the communication…

We present the C++ library CppSs (C++ super-scalar), which provides efficient task-parallelism without the need for special compilers or other software. Any C++ compiler that supports C++11 is sufficient. CppSs features different…

OpenCAEPoro is a parallel numerical simulation software developed in C++ for simulating multiphase and multicomponent flows in porous media. The software utilizes a set of general-purpose compositional model equations, enabling it to handle…

Past decade has seen the development of many shared-memory graph processing frameworks, intended to reduce the effort of developing high performance parallel applications. However many of these frameworks, based on Vertex-centric or…

Executing multiple applications on a single MPSoC brings the major challenge of satisfying multiple quality requirements regarding real-time, energy, etc. Hybrid application mapping denotes the combination of design-time analysis with…