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We present an efficient computational approach to perform real-space electronic structure calculations using an adaptive higher-order finite-element discretization of Kohn-Sham density-functional theory (DFT). To this end, we develop an…

Computational Physics · Physics 2015-06-05 Phani Motamarri , Michael R Nowak , Kenneth Leiter , Jaroslaw Knap , Vikram Gavini

We present PyCDFT, a Python package to compute diabatic states using constrained density functional theory (CDFT). PyCDFT provides an object-oriented, customizable implementation of CDFT, and allows for both single-point…

Materials Science · Physics 2020-07-07 He Ma , Wennie Wang , Siyoung Kim , Man-Hin Cheng , Marco Govoni , Giulia Galli

Density functional theory (DFT) is widely used to predict chemical properties, but its accuracy is limited by functional approximations and their approximate self-consistent densities. Density-corrected DFT (DC-DFT) is the study of the…

Chemical Physics · Physics 2023-07-21 Hayoung Yu , Suhwan Song , Seungsoo Nam , Kieron Burke , Eunji Sim

The present work proposes to use density-functional theory (DFT) to correct for the basis-set error of wave-function theory (WFT). One of the key ideas developed here is to define a range-separation parameter which automatically adapts to a…

ABACUS (Atomic-orbital Based Ab-initio Computation at USTC) is an open-source software for first-principles electronic structure calculations and molecular dynamics simulations. It mainly features density functional theory (DFT) and…

We present SQDFT: a large-scale parallel implementation of the Spectral Quadrature (SQ) method for $\mathcal{O}(N)$ Kohn-Sham Density Functional Theory (DFT) calculations at high temperature. Specifically, we develop an efficient and…

Computational Physics · Physics 2018-03-14 Phanish Suryanarayana , Phanisri P. Pratapa , Abhiraj Sharma , John E. Pask

Density Functional Theory (DFT) underpins much of modern computational chemistry and materials science. Yet, the reliability of DFT-derived predictions of experimentally measurable properties remains fundamentally limited by the need to…

We establish a rigorous density functional theory (DFT) framework for core-level X-ray absorption spectroscopy (XAS) by formulating a constrained search for core-excited states based on the Gunnarsson-Lundqvist theorem. Within this…

Materials Science · Physics 2025-11-25 Seokkyu An , Taisuke Ozaki

In the big data era of observational oceanography, passive acoustics datasets are becoming too high volume to be processed on local computers due to their processor and memory limitations. As a result there is a current need for our…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-10 Paul Nguyen Hong Duc , Dorian Cazau

The widespread use of (generalized) Kohn-Sham density functional theory (KS-DFT) lies in the fact that hierarchical sets of approximations of the exchange-correlation (XC) energy functional can be designed, offering versatile choices to…

Materials Science · Physics 2023-01-31 Igor Ying Zhang , Xinguo Ren

To achieve scalability with today's heterogeneous HPC resources, we need a dramatic shift in our thinking; MPI+X is not enough. Asynchronous Many Task (AMT) runtime systems break down the global barriers imposed by the Bulk Synchronous…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-09 Thomas Heller , Patrick Diehl , Zachary Byerly , John Biddiscombe , Hartmut Kaiser

The development of modern ab initio methods has rapidly increased our understanding of physics, chemistry and materials science. Unfortunately, intensive ab initio calculations are intractable for large and complex systems. On the other…

Materials Science · Physics 2019-01-08 Lin Hu , Rui Su , Bing Huang , Feng Liu

The open-source PyNX toolkit [Favre-Nicolin et al (2011) arXiv:1010.2641, Mandula et al (2016)] has been extended to provide tools for coherent X-ray imaging data analysis and simulation. All calculations can be executed on graphical…

Fourier transformations of pseudo-Boolean functions are popular tools for analyzing functions of binary sequences. Real-world functions often have structures that manifest in a sparse Fourier transform, and previous works have shown that…

Signal Processing · Electrical Eng. & Systems 2023-01-18 Yigit Efe Erginbas , Justin Singh Kang , Amirali Aghazadeh , Kannan Ramchandran

Designing a scientific software stack to meet the needs of the next-generation of mesh-based simulation demands, not only scalable and efficient mesh and data management on a wide range of platforms, but also an abstraction layer that makes…

Mathematical Software · Computer Science 2015-05-19 Michael Lange , Matthew G. Knepley , Gerard J. Gorman

We present our novel evolutionary algorithm for generating Special Quasirandom Structures (SQS) designed to optimize the computational efficiency of Density Functional Theory (DFT) computations. Operating on the premise that symmetry…

Disordered Systems and Neural Networks · Physics 2026-02-12 Andrzej P. Kądzielawa

Density functional theory (DFT) primarily provides a good description of the electronic structure. Thus, DFT primarily deals with length scales as those of a chemical bond, i.e. 10^-10 meter, and with time scales of the order of atomic…

Materials Science · Physics 2007-05-23 Paolo Ruggerone , Alex Kley , Matthias Scheffler

While standard computational protocols for density functional theory (DFT) have universal applicability, differences exist in code implementations. Specific applications require manual parameter optimization, whereas high-throughput…

Materials Science · Physics 2025-08-12 Chenxi Lu , Musen Li , Jeffrey R. Reimers

The Fast Fourier Transform(FFT) is a classic signal processing algorithm that is utilized in a wide range of applications. For image processing, FFT computes on every pixel's value of an image, regardless of their properties in frequency…

Signal Processing · Electrical Eng. & Systems 2020-02-25 Sheng Shi , Runkai Yang , Haihang You

Under the Franck-Condon approximation, we systematically validated the performance of density functional theory (DFT) and the effects of anharmonicity in simulating C/N/O K-edge vibrationally-resolved X-ray spectra of common diatomic…

Chemical Physics · Physics 2025-01-06 Lu Zhang , Minrui Wei , Guoyan Ge , Weijie Hua