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Most deep learning models in medical imaging are trained on adult data with unclear performance on pediatric images. In this work, we aim to address this challenge in the context of automated anatomy segmentation in whole-body Computed…

Image and Video Processing · Electrical Eng. & Systems 2024-04-23 Chih-Ying Liu , Jeya Maria Jose Valanarasu , Camila Gonzalez , Curtis Langlotz , Andrew Ng , Sergios Gatidis

With the continuing advances in scientific instrumentation, scanning microscopes are now able to image physical systems with up to sub-atomic-level spatial resolutions and sub-picosecond time resolutions. Commensurately, they are generating…

3D computer-assisted corrective osteotomy has become the state-of-the-art for surgical treatment of complex bone deformities. Despite available technologies, the automatic generation of clinically acceptable, ready-to-use preoperative…

Clinical diagnostic workups typically follow a modality escalation pathway: after initial clinical evaluation, clinicians begin with routine structural imaging (e.g., MRI), selectively add sequences such as FLAIR or T2 to refine the…

Computer Vision and Pattern Recognition · Computer Science 2026-05-14 Guangqian Yang , Tong Ding , Wenlong Hou , Yue Xun , Ye Du , Qian Niu , Shujun Wang

Segmentation of distinct bones plays a crucial role in diagnosis, planning, navigation, and the assessment of bone metastasis. It supplies semantic knowledge to visualisation tools for the planning of surgical interventions and the…

Image and Video Processing · Electrical Eng. & Systems 2020-10-15 Eva Schnider , Antal Horváth , Georg Rauter , Azhar Zam , Magdalena Müller-Gerbl , Philippe C. Cattin

PanTS is a large-scale, multi-institutional dataset curated to advance research in pancreatic CT analysis. It contains 36,390 CT scans from 145 medical centers, with expert-validated, voxel-wise annotations of over 993,000 anatomical…

Despite the large amount of brain CT data generated in clinical practice, the availability of CT datasets for deep learning (DL) research is currently limited. Furthermore, the data can be insufficiently or improperly prepared for machine…

Image and Video Processing · Electrical Eng. & Systems 2023-09-27 Alessandro Fontanella , Wenwen Li , Grant Mair , Antreas Antoniou , Eleanor Platt , Chloe Martin , Paul Armitage , Emanuele Trucco , Joanna Wardlaw , Amos Storkey

Planktonic organisms are key components of aquatic ecosystems and respond quickly to changes in the environment, therefore their monitoring is vital to understand the changes in the environment. Yet, monitoring plankton at appropriate…

3D tooth segmentation is a prerequisite for computer-aided dental diagnosis and treatment. However, segmenting all tooth regions manually is subjective and time-consuming. Recently, deep learning-based segmentation methods produce…

Computer Vision and Pattern Recognition · Computer Science 2022-06-20 Weiwei Cui , Yaqi Wang , Qianni Zhang , Huiyu Zhou , Dan Song , Xingyong Zuo , Gangyong Jia , Liaoyuan Zeng

Computed tomography (CT) is a central to three-dimensional medical imaging, yet CT-based artificial intelligence remains fragmented across task-specific models for segmentation, classification, registration, and report analysis. Here we…

Computer Vision and Pattern Recognition · Computer Science 2026-05-25 Yuheng Li , Yuan Gao , Haoyu Dong , Yuxiang Lai , Shansong Wang , Mojtaba Safari , James E. Baciak , Xiaofeng Yang

Convolutional Neural Network models have successfully detected retinal illness from optical coherence tomography (OCT) and fundus images. These CNN models frequently rely on vast amounts of labeled data for training, difficult to obtain,…

Computer Vision and Pattern Recognition · Computer Science 2022-01-28 Sourya Dipta Das , Saikat Dutta , Nisarg A. Shah , Dwarikanath Mahapatra , Zongyuan Ge

Advancing human induced pluripotent stem cell derived cardiomyocyte (hiPSC-CM) technology will lead to significant progress ranging from disease modeling, to drug discovery, to regenerative tissue engineering. Yet, alongside these potential…

In this study, we present a method for generating automated anatomy segmentation datasets using a sequential process that involves nnU-Net-based pseudo-labeling and anatomy-guided pseudo-label refinement. By combining various fragmented…

Image and Video Processing · Electrical Eng. & Systems 2023-07-26 Alexander Jaus , Constantin Seibold , Kelsey Hermann , Alexandra Walter , Kristina Giske , Johannes Haubold , Jens Kleesiek , Rainer Stiefelhagen

We present an automated approach to detect and longitudinally track skin lesions on 3D total-body skin surface scans. The acquired 3D mesh of the subject is unwrapped to a 2D texture image, where a trained objected detection model, Faster…

Computer Vision and Pattern Recognition · Computer Science 2022-01-13 Mengliu Zhao , Jeremy Kawahara , Kumar Abhishek , Sajjad Shamanian , Ghassan Hamarneh

The detection of thoracic abnormalities challenge is organized by the Deepwise AI Lab. The challenge is divided into two rounds. In this paper, we present the results of 6 teams which reach the second round. The challenge adopts the…

Image and Video Processing · Electrical Eng. & Systems 2020-10-23 Jie Lian , Jingyu Liu , Yizhou Yu , Mengyuan Ding , Yaoci Lu , Yi Lu , Jie Cai , Deshou Lin , Miao Zhang , Zhe Wang , Kai He , Yijie Yu

This paper presents COT-AD, a comprehensive Dataset designed to enhance cotton crop analysis through computer vision. Comprising over 25,000 images captured throughout the cotton growth cycle, with 5,000 annotated images, COT-AD includes…

Large-scale datasets with high-quality labels are desired for training accurate deep learning models. However, due to the annotation cost, datasets in medical imaging are often either partially-labeled or small. For example, DeepLesion is…

Computer Vision and Pattern Recognition · Computer Science 2021-01-05 Ke Yan , Jinzheng Cai , Youjing Zheng , Adam P. Harrison , Dakai Jin , Youbao Tang , Yuxing Tang , Lingyun Huang , Jing Xiao , Le Lu

Most data-driven models for medical image analysis rely on universal augmentations to improve accuracy. Experimental evidence has confirmed their effectiveness, but the unclear mechanism underlying them poses a barrier to the widespread…

Computer Vision and Pattern Recognition · Computer Science 2025-03-27 Yiqin Zhang , Qingkui Chen , Chen Huang , Zhengjie Zhang , Meiling Chen , Zhibing Fu

3D imaging modalities are becoming increasingly popular and relevant in retinal imaging owing to their effectiveness in highlighting structures in sub-retinal layers. OCT is one such modality which has great importance in the context of…

Computer Vision and Pattern Recognition · Computer Science 2016-12-09 Karthik Gopinath , Jayanthi Sivaswamy

Due to the COVID-19 global pandemic, computer-assisted diagnoses of medical images have gained much attention, and robust methods of semantic segmentation of Computed Tomography (CT) images have become highly desirable. In this work, we…

Image and Video Processing · Electrical Eng. & Systems 2023-03-13 Bruno A. Krinski , Daniel V. Ruiz , Rayson Laroca , Eduardo Todt
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