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Our understanding of evolution is shaped strongly by how we conceive of its fundamental causes. In the original Modern Synthesis, evolution was defined as a process of shifting the frequencies of available alleles at many loci affecting a…

Populations and Evolution · Quantitative Biology 2018-05-17 Arlin Stoltzfus

Reputed intractable, the question of the origin of viruses has long been neglected. In the modern literature 'Virus evolution' has come to refer to study more akin to population genetics, such as the world-wide scrutiny on new polymorphisms…

Populations and Evolution · Quantitative Biology 2007-05-23 Jean-Michel Claverie

Known as one of the hallmarks of cancer [30], cancer cell invasion of human body tissue is a complicated spatio-temporal multiscale process which enables a localised solid tumour to transform into a systemic, metastatic and fatal disease.…

Dynamical Systems · Mathematics 2016-03-25 Lu Peng , Dumitru Trucu , Ping Lin , Alastair Thompson , Mark A. J. Chaplain

Cancer cells are often seen to prefer glycolytic metabolism over oxidative phosphorylation even in the presence of oxygen-a phenomenon termed the Warburg effect. Despite significant strides in the decades since its discovery, a clear basis…

Subcellular Processes · Quantitative Biology 2026-02-02 B. Vibishan , Mohit Kumar Jolly , Akshit Goyal

Cancer cell mutations occur when cells undergo multiple cell divisions, and these mutations can be spontaneous or environmentally-induced. The mechanisms that promote and sustain these mutations are still not fully understood. This study…

Dynamical Systems · Mathematics 2021-10-27 Maher Alwuthaynani , Raluca Eftimie , Dumitru Trucu

Tumor development is characterized by a compromised balance between cell life and death decision mechanisms, which are tighly regulated in normal cells. Understanding this process provides insights for developing new treatments for fighting…

Molecular Networks · Quantitative Biology 2013-01-14 Andrei Zinovyev , Simon Fourquet , Laurent Tournier , Laurence Calzone , Emmanuel Barillot

In this paper, we study a phase-space analysis of a mathematical model of tumor growth with an immune response. Mathematical analysis of the model equations with multipoint initial condition, regarding to dissipativity, boundedness of…

Tissues and Organs · Quantitative Biology 2018-01-17 Veli Shakhmurov

Development combines three basic processes asymmetric --- cell division, signaling and gene regulation --- in a multitude of ways to create an overwhelming diversity of multicellular life-forms. Here, we attempt to chart this diversity…

Molecular Networks · Quantitative Biology 2020-01-01 Somya Mani , Tsvi Tlusty

Cancer is a systemic heterogeneous disease involving complex molecular networks. Tumor formation involves epithelial-mesenchymal transition (EMT), which promotes both metastasis and plasticity of cancer cells. Recent experiments proposed…

Molecular Networks · Quantitative Biology 2023-05-23 Zihao Chen , Jia Lu , Xing-Ming Zhao , Haiyang Yu , Chunhe Li

Cancers are caused by the accumulation of genetic alterations. Since this accumulation takes time, the incidence of most cancers is thought to increase exponentially with age. However, careful measurements of the age-specific incidence…

Other Quantitative Biology · Quantitative Biology 2013-11-01 James P. Brody

Cancer development is driven by mutations and selective forces, including the action of the immune system and interspecific competition. When administered to patients, anti-cancer therapies affect the development and dynamics of tumours,…

Dynamical Systems · Mathematics 2021-09-30 Elena Piretto , Marcello Delitala , Peter S. Kim , Federico Frascoli

Cancer cells co-cultured in vitro reveal unexpected differential growth rates that classical exponential growth models cannot account for. Two non-interacting cell lines were grown in the same culture, and counts of each species were…

Quantitative Methods · Quantitative Biology 2014-12-04 Agnès Hamon , Marie Tosolini , Bernard Ycart , Pont Frédéric , Jean-Jacques Fournié

The proliferation and migration dichotomy of the tumor cell invasion is examined within a two-component continuous time random walk (CTRW) model. The balance equations for the cancer cells of two phenotypes with random switching between…

Cell Behavior · Quantitative Biology 2009-11-13 Sergei Fedotov , Alexander Iomin

Invasiveness, one of the hallmarks of tumor progression, represents the tumor's ability to expand into the host tissue by means of several complex biochemical and biomechanical processes. Since certain aspects of the problem present a…

Biological Physics · Physics 2009-11-13 Caterina Guiot , Nicola Pugno , Pier Paolo Delsanto , Thomas S. Deisboeck

In this paper, we present a probabilistic analysis of a dynamical particle model for the self-adaptive immune response to cancer, as proposed by the first author in a previous work. The model is motivated by the interplay between immune…

Probability · Mathematics 2025-08-06 Christian Kuehn , Quirin Vogel

A tumor often consists of multiple cell subpopulations (clones). Current chemo-treatments often target one clone of a tumor. Although the drug kills that clone, other clones overtake it and the tumor reoccurs. Genome sequencing and…

Molecular Networks · Quantitative Biology 2014-09-09 Edwin Wang , Jinfeng Zou , Naif Zaman , Lenore K. Beitel , Mark Trifiro , Miltiadis Paliouras

This paper proposes a novel chaotic reaction-diffusion model of cellular tumor growth and metastasis. The model is based on the multiscale diffusion cancer-invasion model (MDCM) and formulated by introducing strong nonlinear coupling into…

Cell Behavior · Quantitative Biology 2008-07-29 Tijana T. Ivancevic , Murk J. Bottema , Lakhmi C. Jain

The acid-mediated tumor invasion hypothesis proposes that altered glucose metabolism exhibited by the vast majority of tumors leads to increased acid (H+ ion) production which subsequently facilitates tumor invasion [1-3]. The…

Tissues and Organs · Quantitative Biology 2019-06-10 Ahmed M. Fouad

We present a phase-space analysis of a mathematical model of tumor growth with an immune responses. We consider mathematical analysis of the model equations with multipoint initial condition regarding to dissipativity, boundedness of…

Dynamical Systems · Mathematics 2019-02-28 Veli Shakhmurov , Rishad Shahmurov

Autopsy studies of adults dying of non-cancer causes have shown that virtually all of us possess occult, cancerous lesions. This suggests that, for most individuals, cancer will become dormant and not progress, while only in some will it…

Quantitative Methods · Quantitative Biology 2014-06-06 Sébastien Benzekry , Alberto Gandolfi , Philip Hahnfeldt