Related papers: Excess Coverage Arrays and Levenshtein's Conjectur…
A $(v,k,\lambda)$-covering is a pair $(V, \mathcal{B})$, where $V$ is a $v$-set of points and $\mathcal{B}$ is a collection of $k$-subsets of $V$ (called blocks), such that every unordered pair of points in $V$ is contained in at least…
A $t$-covering array with entries from the alphabet ${\cal Q}=\{0,1,\ldots,q-1\}$ is a $k\times n$ stack, so that for any choice of $t$ (typically non-consecutive) columns, each of the $q^{t}$ possible $t$-letter words over ${\cal Q}$…
The Levenshtein sequence reconstruction problem studies the reconstruction of a transmitted sequence from multiple erroneous copies of it. A fundamental question in this field is to determine the minimum number of erroneous copies required…
A $(v,k,t)$ {\em covering design}, or {\em covering}, is a family of $k$-subsets, called blocks, chosen from a $v$-set, such that each $t$-subset is contained in at least one of the blocks. The number of blocks is the covering's {\em size},…
We prove a lower bound of exp(-C (log(2/alpha))^7)N^{k-1} to the number of solutions of an invariant equation in k variables, contained in a set of density alpha. Moreover, we give a Behrend-type construction for the same problem with the…
Two vectors $x,y$ in $\mathbb{Z}_g^n$ are $ qualitatively$ $ independent$ if for all pairs $(a,b)\in \mathbb{Z}_g\times \mathbb{Z}_g$, there exists $i\in \{1,2,\ldots,n\}$ such that $(x_i,y_i)=(a,b)$. A covering array on a graph $G$,…
Let $\mathcal{S}_n$ be the symmetric group on the set $[n]:=\{1,2,\ldots,n\}$. A family $\mathcal{F}\subset \mathcal{S}_n$ is called intersecting if for every $\sigma,\pi\in \mathcal{F}$ there exists some $i\in [n]$ such that…
A triple array is a rectangular array containing letters, each letter occurring equally often with no repeats in rows or columns, such that the number of letters common to two rows, two columns, or a row and a column are (possibly…
For $S$ a set of positive integers, and $k$ and $r$ fixed positive integers, denote by $f(S,k;r)$ the least positive integer $n$ (if it exists) such that within every $r$-coloring of $\{1,2,...,n\}$ there must be a monochromatic sequence…
Let $A_{s,k}(m)$ be the maximum number of distinct letters in any sequence which can be partitioned into $m$ contiguous blocks of pairwise distinct letters, has at least $k$ occurrences of every letter, and has no subsequence forming an…
In this paper we enumerate $k$-noncrossing RNA pseudoknot structures with given minimum arc- and stack-length. That is, we study the numbers of RNA pseudoknot structures with arc-length $\ge 3$, stack-length $\ge \sigma$ and in which there…
A $q$-ary $t$-covering array is an $m \times n$ matrix with entries from $\{0, 1, ..., q-1\}$ with the property that for any $t$ column positions, all $q^t$ possible vectors of length $t$ occur at least once. One wishes to minimize $m$ for…
In a DNA sequence, we have the celebrated Watson-Crick complement $\overline{T}=A$, $\overline{A}=T$, $\overline{C}=G$, and $\overline{G}=C$. Given an integer $m\ge 2$, a secondary structure in a DNA sequence refers to the existence of two…
Given positive integers $k\leq d$ and a finite field $\mathbb{F}$, a set $S\subset\mathbb{F}^{d}$ is $(k,c)$-subspace evasive if every $k$-dimensional affine subspace contains at most $c$ elements of $S$. By a simple averaging argument, the…
We study the classic set cover problem from the perspective of sub-linear algorithms. Given access to a collection of $m$ sets over $n$ elements in the query model, we show that sub-linear algorithms derived from existing techniques have…
In this paper, we introduce saturation and semisaturation functions of sequences, and we prove a number of fundamental results about these functions. Given a forbidden sequence $u$ with $r$ distinct letters, we say that a sequence $s$ on a…
In the paper, the Levenshtein's sequence reconstruction problem is considered in the case where at most $t$ substitution errors occur in each of the $N$ channels and the decoder outputs a list of length $\mathcal{L}$. Moreover, it is…
As part of a larger program aimed at better quantifying the uncertainties in stellar computations, we attempt to calibrate the extent of convective overshooting in low to intermediate mass stars by means of eclipsing binary systems. We…
Covering arrays for words of length $t$ over a $d$ letter alphabet are $k \times n$ arrays with entries from the alphabet so that for each choice of $t$ columns, each of the $d^t$ $t$-letter words appears at least once among the rows of the…
Covering arrays are generalizations of orthogonal arrays that have been widely studied and are used in software testing. The probabilistic method has been employed to derive upper bounds on the sizes of minimum covering arrays and give…