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Purpose: To apply a convolutional neural network (CNN) to develop a system that segments intensity calibration phantom regions in computed tomography (CT) images, and to test the system in a large cohort to evaluate its robustness. Methods:…

Computer Vision and Pattern Recognition · Computer Science 2020-12-22 Keisuke Uemura , Yoshito Otake , Masaki Takao , Mazen Soufi , Akihiro Kawasaki , Nobuhiko Sugano , Yoshinobu Sato

Accurate uncertainty estimation is a critical need for the medical imaging community. A variety of methods have been proposed, all direct extensions of classification uncertainty estimations techniques. The independent pixel-wise…

Image and Video Processing · Electrical Eng. & Systems 2022-06-16 Thierry Judge , Olivier Bernard , Mihaela Porumb , Agis Chartsias , Arian Beqiri , Pierre-Marc Jodoin

Automatic delineation of organ-at-risk (OAR) and gross-tumor-volume (GTV) is of great significance for radiotherapy planning. However, it is a challenging task to learn powerful representations for accurate delineation under limited pixel…

Image and Video Processing · Electrical Eng. & Systems 2022-04-21 Jiacheng Wang , Xiaomeng Li , Yiming Han , Jing Qin , Liansheng Wang , Zhou Qichao

Medical image segmentation is a crucial task in medical image analysis, but it can be very challenging especially when there are less labeled data but with large unlabeled data. Contrastive learning has proven to be effective for medical…

Computer Vision and Pattern Recognition · Computer Science 2025-02-11 Shihuan He , Zhihui Lai , Ruxin Wang , Heng Kong

A key limitation of deep convolutional neural networks (DCNN) based image segmentation methods is the lack of generalizability. Manually traced training images are typically required when segmenting organs in a new imaging modality or from…

Computer Vision and Pattern Recognition · Computer Science 2019-10-01 Yuankai Huo , Zhoubing Xu , Hyeonsoo Moon , Shunxing Bao , Albert Assad , Tamara K. Moyo , Michael R. Savona , Richard G. Abramson , Bennett A. Landman

We present a fully-supervized method for learning to segment data structured by an adjacency graph. We introduce the graph-structured contrastive loss, a loss function structured by a ground truth segmentation. It promotes learning vertex…

Machine Learning · Computer Science 2019-06-26 Loic Landrieu , Mohamed Boussaha

Ultrasound imaging is challenging to interpret due to non-uniform intensities, low contrast, and inherent artifacts, necessitating extensive training for non-specialists. Advanced representation with clear tissue structure separation could…

Computer Vision and Pattern Recognition · Computer Science 2024-08-06 Oleksandra Tmenova , Yordanka Velikova , Mahdi Saleh , Nassir Navab

This paper proposes an adaptive margin contrastive learning method for 3D semantic segmentation on point clouds. Most existing methods use equally penalized objectives, which ignore the per-point ambiguities and less discriminated features…

Computer Vision and Pattern Recognition · Computer Science 2025-07-10 Yang Chen , Yueqi Duan , Haowen Sun , Jiwen Lu , Yap-Peng Tan

Chromosome analysis and identification from metaphase images is a critical part of cytogenetics based medical diagnosis. It is mainly used for identifying constitutional, prenatal and acquired abnormalities in the diagnosis of genetic…

Computer Vision and Pattern Recognition · Computer Science 2022-09-13 Amritha S Pallavoor , Prajwal A , Sundareshan TS , Sreekanth K Pallavoor

Medical image segmentation plays an important role in clinical decision making, treatment planning, and disease tracking. However, it still faces two major challenges. On the one hand, there is often a ``soft boundary'' between foreground…

Image and Video Processing · Electrical Eng. & Systems 2024-12-12 Mengqi Lei , Haochen Wu , Xinhua Lv , Xin Wang

Medical image segmentation is a fundamental yet challenging task due to the arduous process of acquiring large volumes of high-quality labeled data from experts. Contrastive learning offers a promising but still problematic solution to this…

Computer Vision and Pattern Recognition · Computer Science 2025-02-14 Shuang Zeng , Lei Zhu , Xinliang Zhang , Micky C Nnamdi , Wenqi Shi , J Ben Tamo , Qian Chen , Hangzhou He , Lujia Jin , Zifeng Tian , Qiushi Ren , Zhaoheng Xie , Yanye Lu

Medical image segmentation is important for computer-aided diagnosis. Good segmentation demands the model to see the big picture and fine details simultaneously, i.e., to learn image features that incorporate large context while keep high…

Image and Video Processing · Electrical Eng. & Systems 2021-06-03 Shaohua Li , Xiuchao Sui , Xiangde Luo , Xinxing Xu , Yong Liu , Rick Goh

For compression fracture detection and evaluation, an automatic X-ray image segmentation technique that combines deep-learning and level-set methods is proposed. Automatic segmentation is much more difficult for X-ray images than for CT or…

Medical Physics · Physics 2019-04-17 Kang Cheol Kim , Hyun Cheol Cho , Tae Jun Jang , Jong Mun Choi , Jin Keun Seo

Accurate segmentation of pulmonary vessels plays a very critical role in diagnosing and assessing various lung diseases. Currently, many automated algorithms are primarily targeted at CTPA (Computed Tomography Pulmonary Angiography) types…

Image and Video Processing · Electrical Eng. & Systems 2025-05-20 Ying Ming , Shaoze Luo , Longfei Zhao , Ruijie Zhao , Bing Li , Qiqi Xu , Wei Song

The claustrum (Cl) is a thin grey matter structure located in the center of each brain hemisphere. Cl has been hypothesized as a central hub of the brain for multisensory/sensorimotor integration, consciousness, and attention. Accumulating…

Quantitative Methods · Quantitative Biology 2020-10-14 Seung Suk Kang , Joseph Bodenheimer , Tracey Butler

Deep learning has demonstrated significant improvements in medical image segmentation using a sufficiently large amount of training data with manual labels. Acquiring well-representative labels requires expert knowledge and exhaustive…

Computer Vision and Pattern Recognition · Computer Science 2021-06-15 Jinxi Xiang , Zhuowei Li , Wenji Wang , Qing Xia , Shaoting Zhang

Confidence-based pseudo-label selection usually generates overly confident yet incorrect predictions, due to the early misleadingness of model and overfitting inaccurate pseudo-labels in the learning process, which heavily degrades the…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Peng Zhang , Zhihui Lai , Heng Kong

Non-contrast computed tomography (NCCT) is commonly acquired for lung cancer screening, assessment of general abdominal pain or suspected renal stones, trauma evaluation, and many other indications. However, the absence of contrast limits…

Image and Video Processing · Electrical Eng. & Systems 2022-05-13 Ho Hin Lee , Yucheng Tang , Riqiang Gao , Qi Yang , Xin Yu , Shunxing Bao , James G. Terry , J. Jeffrey Carr , Yuankai Huo , Bennett A. Landman

To segment 4K or 6K ultra high-resolution images needs extra computation consideration in image segmentation. Common strategies, such as down-sampling, patch cropping, and cascade model, cannot address well the balance issue between…

Computer Vision and Pattern Recognition · Computer Science 2025-02-24 Tiancheng Shen , Yuechen Zhang , Lu Qi , Jason Kuen , Xingyu Xie , Jianlong Wu , Zhe Lin , Jiaya Jia

Volumetric cell segmentation in fluorescence microscopy images is important to study a wide variety of cellular processes. Applications range from the analysis of cancer cells to behavioral studies of cells in the embryonic stage. Like in…

Image and Video Processing · Electrical Eng. & Systems 2022-11-29 Royden Wagner , Karl Rohr