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Four-dimensional Scanning Transmission Electron Microscopy (4D-STEM) is a powerful technique for high-resolution and high-precision materials characterization at multiple length scales, including the characterization of beam-sensitive…

Applied Physics · Physics 2023-08-11 Hsu-Chih Ni , Renliang Yuan , Jiong Zhang , Jian-Min Zuo

Electrical impedance tomography (EIT) is an imaging modality in which the conductivity distribution inside a target is reconstructed based on voltage measurements from the surface of the target. Reconstructing the conductivity distribution…

Mathematical Physics · Physics 2012-07-05 Antti Lipponen , Aku Seppänen , Jari Kaipio

Current end-to-end (E2E) and plug-and-play (PnP) image reconstruction algorithms approximate the maximum a posteriori (MAP) estimate but cannot offer sampling from the posterior distribution, like diffusion models. By contrast, it is…

Image and Video Processing · Electrical Eng. & Systems 2025-03-24 Jyothi Rikhab Chand , Mathews Jacob

Ptychography promises diffraction limited resolution without the need for high resolution lenses. To achieve high resolution one has to solve the phase problem for many partially overlapping frames. Here we review some of the existing…

Optics · Physics 2012-09-24 C. Yang , J. Qian , A. Schirotzek , F. Maia , S. Marchesini

Electrical impedance tomography (EIT) is a non-invasive functional imaging technology. In order to enhance the quality of lung EIT images, novel algorithms, namely LSTM-LSTM, LSTM-BiLSTM, BiLSTM-LSTM, and BiLSTM-BiLSTM, leveraging LSTM or…

Biological Physics · Physics 2025-04-22 Zhenzhong Song , Jianping Li , Jun Zhang , Hanyun Wen , Suqin Zhang , Wei Jiang , Xingxing Zhou

Preserving topological structures is important in real-world applications, particularly in sensitive domains such as healthcare and medicine, where the correctness of human anatomy is critical. However, most existing image editing models…

Computer Vision and Pattern Recognition · Computer Science 2024-11-27 Nivetha Jayakumar , Srivardhan Reddy Gadila , Tonmoy Hossain , Yangfeng Ji , Miaomiao Zhang

Huge numbers of short reads are being generated for mapping back to the genome to discover the frequency of transcripts, miRNAs, DNAase hypersensitive sites, FAIRE regions, nucleosome occupancy, etc. Since these reads are typically short…

Genomics · Quantitative Biology 2009-12-31 Peter J. Waddell , Timothy Herston

In order to determine the 3D structure of a thick sample, researchers have recently combined ptychography (for high resolution) and tomography (for 3D imaging) in a single experiment. 2-step methods are usually adopted for reconstruction,…

Image and Video Processing · Electrical Eng. & Systems 2020-07-21 Huibin Chang , Pablo Enfedaque , Stefano Marchesini

Photoacoustic imaging (PAI) suffers from inherent limitations that can degrade the quality of reconstructed results, such as noise, artifacts and incomplete data acquisition caused by sparse sampling or partial array detection. In this…

Optics · Physics 2025-01-07 Yu Zhang , Shuang Li , Yibing Wang , Yu Sun , Wenyi Xiang

We introduce FlowTIE, a neural-network-based framework for phase reconstruction from 4D-Scanning Transmission Electron Microscopy (STEM) data, which integrates the Transport of Intensity Equation (TIE) with a flow-based representation of…

Machine Learning · Computer Science 2025-11-12 Arya Bangun , Maximilian Töllner , Xuan Zhao , Christian Kübel , Hanno Scharr

Electron microscopy has shown to be a very powerful tool to map the chemical nature of samples at various scales down to atomic resolution. However, many samples can not be analyzed with an acceptable signal-to-noise ratio because of the…

Image and Video Processing · Electrical Eng. & Systems 2018-02-28 Étienne Monier , Thomas Oberlin , Nathalie Brun , Marcel Tencé , Marta de Frutos , Nicolas Dobigeon

Low-rank matrix approximation play a ubiquitous role in various applications such as image processing, signal processing, and data analysis. Recently, random algorithms of low-rank matrix approximation have gained widespread adoption due to…

Numerical Analysis · Mathematics 2024-04-29 Weijie Shen , Weiwei Xu , Lei Zhu

Sparse-view computed tomography (CT) is known as a widely used approach to reduce radiation dose while accelerating imaging through lowered projection views and correlated calculations. However, its severe imaging noise and streaking…

Image and Video Processing · Electrical Eng. & Systems 2021-01-20 Yitong Liu , Ken Deng , Chang Sun , Hongwen Yang

Ptychography is an enabling coherent diffraction imaging technique for both fundamental and applied sciences. Its applications in optical microscopy, however, fall short for its low imaging throughput and limited resolution. Here, we report…

Electrical Impedance Tomography (EIT) systems are becoming popular because they present several advantages over competing systems. However, EIT leads to images with very low resolution. Moreover, the nonuniform sampling characteristic of…

Computer Vision and Pattern Recognition · Computer Science 2019-05-01 Ricardo A. Borsoi , Julio C. C. Aya , Guilherme H. Costa , José C. M. Bermudez

Three-dimensional electron diffraction (3D ED) has emerged as a powerful method for solving the structures of sub-micron-sized particles down to nanoparticles. However, it faces technical challenges when applied to beam-sensitive samples or…

Strong multiple scattering of the probe in scanning transmission electron microscopy (STEM) means image simulations are usually required for quantitative interpretation and analysis of elemental maps produced by electron energy-loss…

Materials Science · Physics 2019-12-25 Hamish G. Brown , Jim Ciston , Colin Ophus

Inspired by the masked language modeling (MLM) in natural language processing tasks, the masked image modeling (MIM) has been recognized as a strong self-supervised pre-training method in computer vision. However, the high random mask ratio…

Computer Vision and Pattern Recognition · Computer Science 2024-06-04 Zhaowen Li , Yousong Zhu , Zhiyang Chen , Wei Li , Chaoyang Zhao , Rui Zhao , Ming Tang , Jinqiao Wang

This paper presents an iterative inversion algorithm for computed tomography image reconstruction that performs well in terms of accuracy and speed using limited data. The computational method combines an image domain technique and…

Image and Video Processing · Electrical Eng. & Systems 2019-01-17 Victor Churchill , Anne Gelb

In computational PDE-based inverse problems, a finite amount of data is collected to infer unknown parameters in the PDE. In order to obtain accurate inferences, the collected data must be informative about the unknown parameters. How to…

Numerical Analysis · Mathematics 2021-05-04 Tan Bui-Thanh , Qin Li , Leonardo Zepeda-Núñez