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Despite the molecular evidence that close to linear steady state I-V relationship in mammalian astrocytes reflects a total current resulting from more than one differently regulated K+ conductances, detailed ODE models of membrane voltage…

Neurons and Cognition · Quantitative Biology 2023-05-03 Predrag Janjic , Dimitar Solev , Ljupco Kocarev

NMDA receptors (NMDA-R) typically contribute to excitatory synaptic transmission in the central nervous system. While calcium influx through NMDA-R plays a critical role in synaptic plasticity, experimental evidence indicates that…

Neurons and Cognition · Quantitative Biology 2020-02-03 David Gall , Geneviève Dupont

We applied a periodic magnetic field of frequency 16 Hz and amplitude 16 nT to a human I_Ks channel, expressed in a Xenopus oocyte and varied the membrane depolarization between -100 mV and +100 mV. We observed a maximal increase of about…

Quantitative Methods · Quantitative Biology 2009-05-21 M. Shaked , G. Gibor , B. Attali , Z. Schuss

Potassium (K-) channels catalyze K+ ion permeation across cellular membranes while simultaneously discriminating their permeation over Na+ ions by more than a factor of a thousand. Structural studies show bare K+ ions occupying the…

Biological Physics · Physics 2009-11-13 Sameer Varma , Susan B. Rempe

The optical bistability caused by the coupling between modes of the parallel-plate waveguide and a nonlinear hemicylindrical crystal is studied using theoretical and numerical analysis. In such a system a waveguide channel is parallelly…

Optics · Physics 2022-01-19 Henrik Parsamyan , Khachik Sahakyan , Khachatur Nerkararyan

The optical bistability have been studied theoretically in a multi-mode optomechanical system with two mechanical oscillators independently coupled to two cavities in addition to direct tunnel coupling between cavities. It is proved that…

Quantum Physics · Physics 2021-05-13 Zhen Wang , Cheng Jiang , Yong He , Chang-Ying Wang , Xiao-Lei Yin , Heng-Mei Li , Hong-Chun Yuan

Neuronal calcium (Ca2+) signaling represents a molecular trigger for diverse central nervous system adaptations and maladaptions. The altered function of dorsal spinal inhibitory interneurons is strongly implicated in the mechanisms…

Neurons and Cognition · Quantitative Biology 2019-02-19 Anna M. Hagenston , Sara Ben Ayed , Hilmar Bading

The large-conductance, calcium-activated potassium (BK) channel lacks the typical intracellular bundle-crossing gate present in most ion channels of the 6TM family. This observation, initially inferred from Ca$^{2+}$-free-pore accessibility…

Biomolecules · Quantitative Biology 2024-05-09 Lucia Coronel , Giovanni Di Muccio , Brad Rothberg , Alberto Giacomello , Vincenzo Carnevale

We investigate calcium signaling feedback through calcium-activated potassium channels of a dendritic spine by applying the immersed boundary method with electrodiffusion. We simulate the stochastic gating of such ion channels and the…

Subcellular Processes · Quantitative Biology 2020-09-28 Pilhwa Lee

Biological and artificial learning systems alike confront the plasticity-stability dilemma. In the brain, neuromodulators such as acetylcholine and noradrenaline relieve this tension by tuning neuronal gain and inhibitory gating, balancing…

Neurons and Cognition · Quantitative Biology 2025-07-14 Alejandro Rodriguez-Garcia , Christopher J. Whyte , Brandon R. Munn , Jie Mei , James M. Shine , Srikanth Ramaswamy

The calcium (Ca$^{2+}$) signalling system is important for many cellular processes within the human body. Signals are transmitted within the cell by releasing Ca$^{2+}$ from the endoplasmic reticulum (ER) into the cytosol via clusters of…

Quantitative Methods · Quantitative Biology 2024-02-01 Molly Hawker , Pengxing Cao , James Sneyd , Ivo Siekmann

Potassium channels play critical roles in many physiological processes, providing a selective permeation route for K+ ions in and out of a cell, by employing a carefully designed selectivity filter, evolutionarily conserved from viruses to…

Biological Physics · Physics 2021-04-16 Andrei Mironenko , Ulrich Zachariae , Bert L. de Groot , Wojciech Kopec

The interaction of a single-mode field with both a weak Kerr medium and a parametric nonlinearity in an intrinsically nonlinear optomechanical system is studied. The nonlinearities due to the optomechanical coupling and Kerr-down conversion…

Quantum Physics · Physics 2015-04-07 S. Shahidani , M. H. Naderi , M. Soltanolkotabi , Sh. Barzanjeh

Endothelial cells release various vasorelaxing molecules, such as nitric oxide and prostacyclin, along with defined factors that induce hyperpolarization of vascular smooth muscle cells through the opening of calcium-sensitive potassium…

Molecular Networks · Quantitative Biology 2025-08-05 Paolo Madeddu , Styliani Goulopoulou , David Wambeke

We report on the observation of a novel manifestation of saturation-induced optical bistability in a resonantly pumped optical ring cavity interacting strongly with a cloud of atoms via a narrow atomic transition. The bistability emerges,…

Synchronized rhythmic oscillatory activity in the beta frequency band in the basal ganglia (BG) is a hallmark of Parkinson's disease (PD). Recent experiments and theoretical studies have demonstrated the crucial roles of T-type and L-type…

Neurons and Cognition · Quantitative Biology 2026-01-09 Choongseok Park , Leonid L. Rubchinsky , Sungwoo Ahn

Bistable mechanical vibration is observed in a cavity magnomechanical system, which consists of a microwave cavity mode, a magnon mode, and a mechanical vibration mode of a ferrimagnetic yttrium-iron-garnet (YIG) sphere. The bistability…

Quantum Physics · Physics 2022-09-14 Rui-Chang Shen , Jie Li , Zhi-Yuan Fan , Yi-Pu Wang , J. Q. You

We study the dynamics of intracellular calcium oscillations in the presence of proteins that bind calcium on multiple sites and that are generally believed to act as passive calcium buffers in cells. We find that multisite calcium-binding…

Subcellular Processes · Quantitative Biology 2015-05-14 Roberto Chignola , Alessio Del Fabbro , Edoardo Milotti

We develop a self-consistent method to study the optical response of metallic gratings with nonlinear media embedded within their subwavelength slits. An optical Kerr nonlinearity is considered. Due to the large E-fields associated with the…

Materials Science · Physics 2016-08-31 J. A. Porto , L. Martin-Moreno , F. J. Garcia-Vidal

This work concerns the question of how two important dynamical properties, oscillations and bistability, emerge in an important biological signaling network. Specifically, we consider a model for dual-site phosphorylation and…

Molecular Networks · Quantitative Biology 2019-03-08 Nida Obatake , Anne Shiu , Xiaoxian Tang , Angelica Torres
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