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Graph accelerators have emerged as a promising solution for processing large-scale sparse graphs, leveraging the in-situ compu-tation of ReRAM-based crossbars to maximize computational efficiency. However, existing designs suffer from…

Hardware Architecture · Computer Science 2025-12-02 Masoud Rahimi , Sébastien Le Beux

Graph similarity computation (GSC) is to calculate the similarity between one pair of graphs, which is a fundamental problem with fruitful applications in the graph community. In GSC, graph edit distance (GED) and maximum common subgraph…

Machine Learning · Computer Science 2024-12-16 Haoran Zheng , Jieming Shi , Renchi Yang

Graph diffusion models have recently been proposed to synthesize entire graphs, such as molecule graphs. Although existing methods have shown great performance in generating entire graphs for graph-level learning tasks, no graph diffusion…

Machine Learning · Computer Science 2025-03-18 Yancheng Wang , Changyu Liu , Yingzhen Yang

In this article we introduce Graph Generation, an enhanced Column Generation (CG) algorithm for solving expanded linear programming relaxations of mixed integer linear programs. To apply Graph Generation, we must be able to map any given…

Optimization and Control · Mathematics 2021-10-05 Julian Yarkony , Naveed Haghani , Amelia Regan

This study addresses the challenge of forming effective groups in collaborative problem-solving environments. Recognizing the complexity of human interactions and the necessity for efficient collaboration, we propose a novel approach…

Computers and Society · Computer Science 2024-03-18 Zheng Fang , Fucai Ke , Jae Young Han , Zhijie Feng , Toby Cai

A wide range of graph learning tasks, such as structure discovery, temporal graph analysis, and combinatorial optimization, focus on inferring graph structures from data, rather than making predictions on given graphs. However, the…

Graphons are general and powerful models for generating graphs of varying size. In this paper, we propose to directly model graphons using neural networks, obtaining Implicit Graphon Neural Representation (IGNR). Existing work in modeling…

Machine Learning · Computer Science 2023-04-03 Xinyue Xia , Gal Mishne , Yusu Wang

This study aims to optimize the existing retrieval-augmented generation model (RAG) by introducing a graph structure to improve the performance of the model in dealing with complex knowledge reasoning tasks. The traditional RAG model has…

Information Retrieval · Computer Science 2024-11-07 Yuxin Dong , Shuo Wang , Hongye Zheng , Jiajing Chen , Zhenhong Zhang , Chihang Wang

We propose a novel positional encoding for learning graph on Transformer architecture. Existing approaches either linearize a graph to encode absolute position in the sequence of nodes, or encode relative position with another node using…

Machine Learning · Computer Science 2022-10-17 Wonpyo Park , Woonggi Chang , Donggeon Lee , Juntae Kim , Seung-won Hwang

The ever-increasing complexity and operational diversity of modern Neural Networks (NNs) have caused the need for low-power and, at the same time, high-performance edge devices for AI applications. Coarse Grained Reconfigurable…

The graph Transformer emerges as a new architecture and has shown superior performance on various graph mining tasks. In this work, we observe that existing graph Transformers treat nodes as independent tokens and construct a single long…

Machine Learning · Computer Science 2023-02-28 Jinsong Chen , Kaiyuan Gao , Gaichao Li , Kun He

Cell formation is a critical step in the design of cellular manufacturing systems. Recently, it was tackled using a cut-based-graph-partitioning model. This model meets real-life production systems requirements as it uses the actual amount…

Discrete Mathematics · Computer Science 2016-12-19 Boulif Menouar

Integrating data from heterogeneous sources is often modeled as merging graphs. Given two or more 'compatible', but not-isomorphic graphs, the first step is to identify a graph alignment, where a potentially partial mapping of vertices…

Social and Information Networks · Computer Science 2018-03-13 Abdurrahman Yaşar , Ümit V. Çatalyürek

Graph neural networks (GNNs) learn to represent nodes by aggregating information from their neighbors. As GNNs increase in depth, their receptive field grows exponentially, leading to high memory costs. Several existing methods address this…

Machine Learning · Computer Science 2025-07-16 Taraneh Younesian , Daniel Daza , Emile van Krieken , Thiviyan Thanapalasingam , Peter Bloem

In the logic synthesis stage, structure transformations in the synthesis tool need to be combined into optimization sequences and act on the circuit to meet the specified circuit area and delay. However, logic synthesis optimization…

Hardware Architecture · Computer Science 2025-12-16 Chenghao Yang , Zhongda Wang , Yinshui Xia , Zhufei Chu

We present GRAPE (Group Representational Position Encoding), a unified framework for positional encoding based on group actions. GRAPE unifies two families of mechanisms: (i) multiplicative rotations (Multiplicative GRAPE) in…

Machine Learning · Computer Science 2026-05-15 Yifan Zhang , Zixiang Chen , Yifeng Liu , Zhen Qin , Huizhuo Yuan , Kangping Xu , Yang Yuan , Quanquan Gu , Andrew Chi-Chih Yao

Graph In-Context Learning, with the ability to adapt pre-trained graph models to novel and diverse downstream graphs without updating any parameters, has gained much attention in the community. The key to graph in-context learning is to…

Machine Learning · Computer Science 2025-05-06 Rui Lv , Zaixi Zhang , Kai Zhang , Qi Liu , Weibo Gao , Jiawei Liu , Jiaxia Yan , Linan Yue , Fangzhou Yao

We propose a combination of a variational autoencoder and a transformer based model which fully utilises graph convolutional and graph pooling layers to operate directly on graphs. The transformer model implements a novel node encoding…

Machine Learning · Computer Science 2021-04-12 Joshua Mitton , Hans M. Senn , Klaas Wynne , Roderick Murray-Smith

Graph embedding provides an efficient solution for graph analysis by converting the graph into a low-dimensional space which preserves the structure information. In contrast to the graph structure data, the i.i.d. node embedding can be…

Machine Learning · Computer Science 2017-05-16 Hongyun Cai , Vincent W. Zheng , Kevin Chen-Chuan Chang

Graph algorithms are increasingly used in applications that exploit large databases. However, conventional processor architectures are inadequate for handling the throughput and memory requirements of graph computation. Lincoln Laboratory's…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-12-13 William S. Song , Vitaliy Gleyzer , Alexei Lomakin , Jeremy Kepner