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Network topology inference is a prominent problem in Network Science. Most graph signal processing (GSP) efforts to date assume that the underlying network is known, and then analyze how the graph's algebraic and spectral characteristics…

Signal Processing · Electrical Eng. & Systems 2019-05-22 Gonzalo Mateos , Santiago Segarra , Antonio G. Marques , Alejandro Ribeiro

We introduce a new approach to functional causal modeling from observational data, called Causal Generative Neural Networks (CGNN). CGNN leverages the power of neural networks to learn a generative model of the joint distribution of the…

This article introduces PAGE, a parameterized generative interpretive framework. PAGE is capable of providing faithful explanations for any graph neural network without necessitating prior knowledge or internal details. Specifically, we…

Machine Learning · Computer Science 2024-09-09 Yang Qiu , Wei Liu , Jun Wang , Ruixuan Li

This paper introduces a generalization of Convolutional Neural Networks (CNNs) to graphs with irregular linkage structures, especially heterogeneous graphs with typed nodes and schemas. We propose a novel spatial convolution operation to…

Machine Learning · Computer Science 2019-07-23 Aravind Sankar , Xinyang Zhang , Kevin Chen-Chuan Chang

This paper studies causal discovery for a directed acyclic graph under a structural equation model with additive heteroscedastic errors. We first establish new identifiability results for location-scale noise models, showing that…

Methodology · Statistics 2026-05-27 Xintao Xia , Li Chen , Yue Hu , Chunlin Li

Graph neural networks have shown great ability in representation (GNNs) learning on graphs, facilitating various tasks. Despite their great performance in modeling graphs, recent works show that GNNs tend to inherit and amplify the bias…

Machine Learning · Computer Science 2023-08-22 Zhimeng Guo , Jialiang Li , Teng Xiao , Yao Ma , Suhang Wang

Graph Neural Networks (GNNs) have shown satisfying performance in various graph analytical problems. Hence, they have become the \emph{de facto} solution in a variety of decision-making scenarios. However, GNNs could yield biased results…

Machine Learning · Computer Science 2022-06-27 Yushun Dong , Song Wang , Yu Wang , Tyler Derr , Jundong Li

Graph Neural Networks (GNNs) have advanced spatiotemporal forecasting by leveraging relational inductive biases among sensors (or any other measuring scheme) represented as nodes in a graph. However, current methods often rely on Recurrent…

Machine Learning · Computer Science 2024-05-30 Aref Einizade , Fragkiskos D. Malliaros , Jhony H. Giraldo

We study causal discovery from observational data in linear Gaussian systems affected by \emph{mixed latent confounding}, where some unobserved factors act broadly across many variables while others influence only small subsets. This…

Machine Learning · Computer Science 2026-01-01 Amir Asiaee , Samhita Pal , James O'quinn , James P. Long

Graph neural networks (GNNs) have shown significant success in learning graph representations. However, recent studies reveal that GNNs often fail to outperform simple MLPs on heterophilous graph tasks, where connected nodes may differ in…

Machine Learning · Computer Science 2025-04-10 Songwei Zhao , Yuan Jiang , Zijing Zhang , Yang Yu , Hechang Chen

We consider testing and learning problems on causal Bayesian networks as defined by Pearl (Pearl, 2009). Given a causal Bayesian network $\mathcal{M}$ on a graph with $n$ discrete variables and bounded in-degree and bounded `confounded…

Data Structures and Algorithms · Computer Science 2018-05-25 Jayadev Acharya , Arnab Bhattacharyya , Constantinos Daskalakis , Saravanan Kandasamy

Federated Graph Learning (FGL) has emerged as a powerful paradigm for decentralized training of graph neural networks while preserving data privacy. However, existing FGL methods are predominantly designed for static graphs and rely on…

Machine Learning · Computer Science 2026-04-01 Yuxuan Liu , Wenchao Xu , Haozhao Wang , Zhiming He , Zhaofeng Shi , Chongyang Xu , Peichao Wang , Boyuan Zhang

Graph Neural Network (GNN) has been demonstrated its effectiveness in dealing with non-Euclidean structural data. Both spatial-based and spectral-based GNNs are relying on adjacency matrix to guide message passing among neighbors during…

Machine Learning · Computer Science 2021-06-09 Yang Hu , Haoxuan You , Zhecan Wang , Zhicheng Wang , Erjin Zhou , Yue Gao

Causal discovery from observational data is an important tool in many branches of science. Under certain assumptions it allows scientists to explain phenomena, predict, and make decisions. In the large sample limit, sound and complete…

Machine Learning · Statistics 2021-07-13 Shami Nisimov , Yaniv Gurwicz , Raanan Y. Rohekar , Gal Novik

The recent focus on microbes in human medicine highlights their potential role in the genetic framework of diseases. To decode the complex interactions among genes, microbes, and diseases, computational predictions of gene-microbe-disease…

Machine Learning · Computer Science 2024-06-28 Kexin Zhang , Feng Huang , Luotao Liu , Zhankun Xiong , Hongyu Zhang , Yuan Quan , Wen Zhang

We focus on the extension of bivariate causal learning methods into multivariate problem settings in a systematic manner via a novel framework. It is purposive to augment the scale to which bivariate causal discovery approaches can be…

Methodology · Statistics 2023-05-29 Hongyi Chen , Maurits Kaptein

Graph Neural Networks (GNNs) extend basic Neural Networks (NNs) by using graph structures based on the relational inductive bias (homophily assumption). While GNNs have been commonly believed to outperform NNs in real-world tasks, recent…

Machine Learning · Computer Science 2022-10-17 Sitao Luan , Chenqing Hua , Qincheng Lu , Jiaqi Zhu , Mingde Zhao , Shuyuan Zhang , Xiao-Wen Chang , Doina Precup

Graph neural networks (GNNs) have demonstrated superior performance for semi-supervised node classification on graphs, as a result of their ability to exploit node features and topological information simultaneously. However, most GNNs…

Machine Learning · Computer Science 2022-06-24 Guoji Fu , Peilin Zhao , Yatao Bian

Identifying critical nodes and links in graphs is a crucial task. These nodes/links typically represent critical elements/communication links that play a key role in a system's performance. However, a majority of the methods available in…

Social and Information Networks · Computer Science 2022-05-31 Sai Munikoti , Laya Das , Balasubramaniam Natarajan

Inferring the graph structure from observed data is a key task in graph machine learning to capture the intrinsic relationship between data entities. While significant advancements have been made in learning the structure of homogeneous…

Machine Learning · Computer Science 2025-03-13 Keyue Jiang , Bohan Tang , Xiaowen Dong , Laura Toni
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