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Since decades, the modelling of metadata has been core to the functioning of any academic library. Its importance has only enhanced with the increasing pervasiveness of Generative Artificial Intelligence (AI)-driven information activities…

Digital Libraries · Computer Science 2025-03-18 Mayukh Bagchi

Benchmarking, which involves collecting reference datasets and demonstrating method performances, is a requirement for the development of new computational tools, but also becomes a domain of its own to achieve neutral comparisons of…

Other Quantitative Biology · Quantitative Biology 2025-07-24 Izaskun Mallona , Charlotte Soneson , Ben Carrillo , Almut Luetge , Daniel Incicau , Reto Gerber , Anthony Sonrel , Mark D. Robinson

Natural language processing (NLP) is an area of artificial intelligence that applies information technologies to process the human language, understand it to a certain degree, and use it in various applications. This area has rapidly…

The field of machine translation has progressed tremendously in recent years. Even though the translation quality has improved significantly, current systems are still unable to produce uniformly acceptable machine translations for the…

Computation and Language · Computer Science 2020-05-11 Meng Zhang , Xin Jiang , Yang Liu , Qun Liu

Medical text embedding models are foundational to a wide array of healthcare applications, ranging from clinical decision support and biomedical information retrieval to medical question answering, yet they remain hampered by two critical…

Computation and Language · Computer Science 2025-08-07 Mohammad Khodadad , Ali Shiraee Kasmaee , Mahdi Astaraki , Hamidreza Mahyar

Mining software repositories often requires classifying artifacts like commits, reviews, code lines, or entire repositories into categories. Human labeling is expensive and error-prone; limited context frequently leads to misclassifications…

Software Engineering · Computer Science 2026-05-07 Johannes Härtel

In multi-label text classification, each textual document can be assigned with one or more labels. Due to this nature, the multi-label text classification task is often considered to be more challenging compared to the binary or multi-class…

Information Retrieval · Computer Science 2019-07-02 Jingcheng Du , Qingyu Chen , Yifan Peng , Yang Xiang , Cui Tao , Zhiyong Lu

Europe's healthcare systems require enhanced interoperability and digitalization, driving a demand for innovative solutions to process legacy clinical data. This paper presents the results of our project, which aims to leverage Large…

Computation and Language · Computer Science 2025-07-09 Aynur Guluzade , Naguib Heiba , Zeyd Boukhers , Florim Hamiti , Jahid Hasan Polash , Yehya Mohamad , Carlos A Velasco

Pathology laboratories are increasingly using digital workflows. This has the potential of increasing lab efficiency, but the digitization process also involves major challenges. Several reports have been published describing the individual…

Human-Computer Interaction · Computer Science 2023-09-25 Lars Ole Schwen , Tim-Rasmus Kiehl , Rita Carvalho , Norman Zerbe , André Homeyer

The prevalence of scientific workflows with high computational demands calls for their execution on various distributed computing platforms, including large-scale leadership-class high-performance computing (HPC) clusters. To handle the…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-02-10 Tainã Coleman , Henri Casanova , Ketan Maheshwari , Loïc Pottier , Sean R. Wilkinson , Justin Wozniak , Frédéric Suter , Mallikarjun Shankar , Rafael Ferreira da Silva

The Semantic Publishing Challenge series aims at investigating novel approaches for improving scholarly publishing using Linked Data technology. In 2014 we had bootstrapped this effort with a focus on extracting information from…

Digital Libraries · Computer Science 2015-08-26 Angelo Di Iorio , Christoph Lange , Anastasia Dimou , Sahar Vahdati

The adoption of large language models (LLMs) to assist clinicians has attracted remarkable attention. Existing works mainly adopt the close-ended question-answering (QA) task with answer options for evaluation. However, many clinical…

This study applies Large Language Models (LLMs) to two foundational Electronic Health Record (EHR) data science tasks: structured data querying (using programmatic languages, Python/Pandas) and information extraction from unstructured…

Computation and Language · Computer Science 2026-01-29 Juan Jose Rubio Jan , Jack Wu , Julia Ive

Classification is an essential and fundamental task in machine learning, playing a cardinal role in the field of natural language processing (NLP) and computer vision (CV). In a supervised learning setting, labels are always needed for the…

Computation and Language · Computer Science 2021-02-04 Irene Li

Supervised text classification is a classical and active area of ML research. In large enterprise, solutions to this problem has significant importance. This is specifically true in ticketing systems where prediction of the type and subtype…

Information Retrieval · Computer Science 2020-12-02 Nabarun Mondal , Mrunal Lohia

Relation extraction aims to identify the target relations of entities in texts. Relation extraction is very important for knowledge base construction and text understanding. Traditional binary relation extraction, including supervised,…

Computation and Language · Computer Science 2020-12-10 Haiyun Jiang , Qiaoben Bao , Qiao Cheng , Deqing Yang , Li Wang , Yanghua Xiao

Page-level analysis of documents has been a topic of interest in digitization efforts, and multimodal approaches have been applied to both classification and page stream segmentation. In this work, we focus on capturing finer semantic…

Machine Learning · Computer Science 2022-05-27 Mehmet Arif Demirtaş , Berke Oral , Mehmet Yasin Akpınar , Onur Deniz

In recent years, deep learning revolutionized machine learning and its applications, producing results comparable to human experts in several domains, including neuroscience. Each year, hundreds of scientific publications present…

Quantitative Methods · Quantitative Biology 2023-01-13 Louis Fabrice Tshimanga , Manfredo Atzori , Federico Del Pup , Maurizio Corbetta

Low-quality data can cause downstream problems in high-stakes applications. Data-centric approach emphasizes on improving dataset quality to enhance model performance. High-quality datasets are needed for general-purpose Large Language…

Computation and Language · Computer Science 2023-10-13 Iva Bojic , Josef Halim , Verena Suharman , Sreeja Tar , Qi Chwen Ong , Duy Phung , Mathieu Ravaut , Shafiq Joty , Josip Car

This paper conducts a comprehensive investigation into applying large language models, particularly on BioBERT, in healthcare. It begins with thoroughly examining previous natural language processing (NLP) approaches in healthcare, shedding…

Artificial Intelligence · Computer Science 2023-10-13 Shyni Sharaf , V. S. Anoop
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