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Developing foundation models in medical imaging requires continuous monitoring of downstream performance. Researchers are burdened with tracking numerous experiments, design choices, and their effects on performance, often relying on…

Computer Vision and Pattern Recognition · Computer Science 2026-04-02 Jan Tagscherer , Sarah de Boer , Lena Philipp , Fennie van der Graaf , Dré Peeters , Joeran Bosma , Lars Leijten , Bogdan Obreja , Ewoud Smit , Alessa Hering

Although Raman spectroscopy is widely used for the investigation of biomedical samples and has a high potential for use in clinical applications, it is not common in clinical routines. One of the factors that obstruct the integration of…

Data Analysis, Statistics and Probability · Physics 2022-01-20 Darina Storozhuk , Oleg Ryabchykov , Juergen Popp , Thomas Bocklitz

Translating neural networks from theory to clinical practice has unique challenges, specifically in the field of neuroimaging. In this paper, we present DeepNeuro, a deep learning framework that is best-suited to putting deep learning…

Computer Vision and Pattern Recognition · Computer Science 2018-08-15 Andrew Beers , James Brown , Ken Chang , Katharina Hoebel , Elizabeth Gerstner , Bruce Rosen , Jayashree Kalpathy-Cramer

Near linear scaling fragment based quantum chemical calculations are becoming increasingly popular for treating large systems with high accuracy and is an active field of research. However, it remains difficult to set up these calculations…

Computational Engineering, Finance, and Science · Computer Science 2012-09-20 Casper Steinmann , Mikael W. Ibsen , Anne S. Hansen , Jan H. Jensen

The use of geometric and symmetry techniques in quantum and classical information processing has a long tradition across the physical sciences as a means of theoretical discovery and applied problem solving. In the modern era, the emergent…

Quantum Physics · Physics 2024-09-10 Elija Perrier

Recent advances in computational modelling of atomic systems, spanning molecules, proteins, and materials, represent them as geometric graphs with atoms embedded as nodes in 3D Euclidean space. In these graphs, the geometric attributes…

Computer-aided design (CAD) is crucial in prototyping 3D objects through geometric instructions (i.e., CAD programs). In practical design workflows, designers often engage in time-consuming reviews and refinements of these prototypes by…

Computer Vision and Pattern Recognition · Computer Science 2025-10-08 Jiali Chen , Xusen Hei , HongFei Liu , Yuancheng Wei , Zikun Deng , Jiayuan Xie , Yi Cai , Li Qing

Designing complex computer-aided design (CAD) models is often time-consuming due to challenges such as computational inefficiency and the difficulty of generating precise models. We propose a novel language-guided framework for industrial…

Artificial Intelligence · Computer Science 2025-05-27 Jianxing Liao , Junyan Xu , Yatao Sun , Maowen Tang , Sicheng He , Jingxian Liao , Shui Yu , Yun Li , Hongguan Xiao

Quantum technologies are rapidly advancing as image classification tasks grow more complex due to large image volumes and extensive parameter updates required by traditional machine learning models. Quantum Machine Learning (QML) offers a…

Quantum Physics · Physics 2025-04-29 Md Farhan Shahriyar , Gazi Tanbhir

Computer-aided design (CAD) is the digital construction of 2D and 3D objects, and is central to a wide range of engineering and manufacturing applications like automobile and aviation. Despite its importance, CAD modeling remains largely a…

Graphics · Computer Science 2026-01-09 Prashant Govindarajan , Davide Baldelli , Jay Pathak , Quentin Fournier , Sarath Chandar

Several visualization schemes have been developed for imaging materials at the atomic level through atom probe tomography. The main shortcoming of these tools is their inability to parallel process data using multi-core computing units to…

Materials Science · Physics 2012-02-07 Hari Dahal , Michael Stukowski , Matthias J. Graf , Alexander V. Balatsky , Krishna Rajan

The program Simourg (Simulator of Usually Requested Geometries) is based on the Geant4 toolkit and created for Monte Carlo simulation of gamma-ray spectrometric nuclear detectors with a simple axial symmetric geometry, which is typical for…

Instrumentation and Detectors · Physics 2025-12-09 V. V. Kobychev

This research presents a machine-learning approach for tumor detection in medical images using convolutional neural networks (CNNs). The study focuses on preprocessing techniques to enhance image features relevant to tumor detection,…

Image and Video Processing · Electrical Eng. & Systems 2024-03-01 Ha Anh Vu

MRI-based medical imaging has become indispensable in modern clinical diagnosis, particularly for brain tumor detection. However, the rapid growth in data volume poses challenges for conventional diagnostic approaches. Although deep…

Computer Vision and Pattern Recognition · Computer Science 2026-03-31 Hayder Saad Abdulbaqi , Mohammed Hadi Rahim , Mohammed Hassan Hadi , Haider Ali Aboud , Ali Hussein Allawi

Aerosol injectors applied in single-particle diffractive imaging experiments demonstrated their potential in efficiently delivering nanoparticles with high density. Continuous optimization of injector design is crucial for achieving…

Simourg is a software based on the Geant4 toolkit and provides the Monte Carlo simulation of nuclear spectrometric setups with simple geometries for such applications as nuclear decay research, radiation safety, and nuclear medicine. With…

Instrumentation and Detectors · Physics 2026-01-07 D. S. Kovalenko , V. V. Kobychev , L. M. Kobycheva , O. V. Zueva

The Genomic Foundation Model (GFM) paradigm is expected to facilitate the extraction of generalizable representations from massive genomic data, thereby enabling their application across a spectrum of downstream applications. Despite…

Genomics · Quantitative Biology 2024-06-06 Zicheng Liu , Jiahui Li , Siyuan Li , Zelin Zang , Cheng Tan , Yufei Huang , Yajing Bai , Stan Z. Li

Denoising diffusion probabilistic models (DDPMs) have pioneered new state-of-the-art results in disciplines such as computer vision and computational biology for diverse tasks ranging from text-guided image generation to structure-guided…

Machine Learning · Computer Science 2024-05-28 Alex Morehead , Jianlin Cheng

The software tool GRworkbench is an ongoing project in visual, numerical General Relativity at The Australian National University. Recently, GRworkbench has been significantly extended to facilitate numerical experimentation in…

General Relativity and Quantum Cosmology · Physics 2016-11-09 A. Moylan , S. M. Scott , A. C. Searle

Scarcity of annotated data, particularly for rare or atypical morphologies, present significant challenges for cell and nuclei segmentation in computational pathology. While manual annotation is labor-intensive and costly, synthetic data…

Computer Vision and Pattern Recognition · Computer Science 2025-10-21 Dominik Winter , Mai Bui , Monica Azqueta Gavaldon , Nicolas Triltsch , Marco Rosati , Nicolas Brieu