Related papers: Improvements on Permutation Reconstruction from Mi…
The problem of reconstructing a sequence of independent and identically distributed symbols from a set of equal size, consecutive, fragments, as well as a dependent reference sequence, is considered. First, in the regime in which the…
We study the minimum diameter problem for a set of inexact points. By inexact, we mean that the precise location of the points is not known. Instead, the location of each point is restricted to a contineus region ($\impre$ model) or a…
Codes over trees were introduced recently to bridge graph theory and coding theory with diverse applications in computer science and beyond. A central challenge lies in determining the maximum number of labelled trees over $n$ nodes with…
The goal of this paper is to understand how exponential-time approximation algorithms can be obtained from existing polynomial-time approximation algorithms, existing parameterized exact algorithms, and existing parameterized approximation…
Codes over permutations under the infinity norm have been recently suggested as a coding scheme for correcting limited-magnitude errors in the rank modulation scheme. Given such a code, we show that a simple relabeling operation, which…
Kayal, Saha and Tavenas [Theory of Computing, 2018] showed that for all large enough integers $n$ and $d$ such that $d\geq \omega(\log{n})$, any syntactic depth four circuit of bounded individual degree $\delta = o(d)$ that computes the…
The Damerau-Levenshtein distance between two sequences is the minimum number of operations (deletions, insertions, substitutions, and adjacent transpositions) required to convert one sequence into another. Notwithstanding a long history of…
Given a set $I \subseteq \mathbb{N}$, consider the sequences $\{d_n(I)\},\{p_n(I)\}$ where for any $n$, $d_n(I)$ and $p_n(I)$ respectively count the number of permutations in the symmetric group $\mathfrak{S}_n$ whose descent set…
Given two permutations $\sigma$ and $\pi$, the \textsc{Permutation Pattern} problem asks if $\sigma$ is a subpattern of $\pi$. We show that the problem can be solved in time $2^{O(\ell^2\log \ell)}\cdot n$, where $\ell=|\sigma|$ and…
Superpermutations are words over a finite alphabet containing every permutation as a factor. Finding the minimal length of a superpermutation is still an open problem. In this article, we introduce superpermutations matrices. We establish a…
In STOC'95 \cite{ADMSS95} Arya et al.\ showed that for any set of $n$ points in $\mathbb R^d$, a $(1+\epsilon)$-spanner with diameter at most 2 (respectively, 3) and $O(n \log n)$ edges (resp., $O(n \log \log n)$ edges) can be built in $O(n…
Minimizers sampling is one of the most widely-used mechanisms for sampling strings [Roberts et al., Bioinformatics 2004]. Let $S=S[1]\ldots S[n]$ be a string over a totally ordered alphabet $\Sigma$. Further let $w\geq 2$ and $k\geq 1$ be…
Permutation Mastermind is a version of the classical mastermind game in which the number of positions $n$ is equal to the number of colors $k$, and repetition of colors is not allowed, neither in the codeword nor in the queries. In this…
Computing the reversal distances of signed permutations is an important topic in Bioinformatics. Recently, a new lower bound for the reversal distance was obtained via the plane permutation framework. This lower bound appears different from…
The graph reconstruction problem has been extensively studied under various query models. In this paper, we propose a new query model regarding the number of connected components, which is one of the most basic and fundamental graph…
Counting permutations of $[n]$ by the number of records, i.e. left-to-right maxima, is a classic problem in combinatorial enumeration. In the first volume of ``The Art of Computer Programming", Donald Knuth demonstrated its relevance for…
A reconstruction problem of words from scattered factors asks for the minimal information, like multisets of scattered factors of a given length or the number of occurrences of scattered factors from a given set, necessary to uniquely…
In this paper, we give a conditional lower bound of $n^{\Omega(k)}$ on running time for the classic k-median and k-means clustering objectives (where n is the size of the input), even in low-dimensional Euclidean space of dimension four,…
We consider the problem of estimating the Attention mechanism in small space, and prove the existence of coresets for it of nearly optimal size. Specifically, we show that for any set of unit-norm keys and values $(K,V)$ in $\mathbb{R}^d$,…
Van der Waerden's theorem states that for any positive integers $k$ and $r$, there exists a smallest value $n = w(k,r)$, called the van der Waerden number, such that every $r$-coloring of $\{1,\dots,n\}$ contains a monochromatic $k$-term…