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Large language models (LLMs) excel at clinical information extraction but their computational demands limit practical deployment. Knowledge distillation--the process of transferring knowledge from larger to smaller models--offers a…

Computation and Language · Computer Science 2025-01-03 Karthik S. Vedula , Annika Gupta , Akshay Swaminathan , Ivan Lopez , Suhana Bedi , Nigam H. Shah

The massive scale and growth of textual biomedical data have made its indexing and classification increasingly important. However, existing research on this topic mainly utilized convolutional and recurrent neural networks, which generally…

Computation and Language · Computer Science 2022-03-08 Bruce Nguyen , Shaoxiong Ji

The ability to predict lung and heart based diseases using deep learning techniques is central to many researchers, particularly in the medical field around the world. In this paper, we present a unique outlook of a very familiar problem of…

Computer Vision and Pattern Recognition · Computer Science 2022-03-30 Sairamvinay Vijayaraghavan , David Haddad , Shikun Huang , Seongwoo Choi

Injecting external domain-specific knowledge (e.g., UMLS) into pretrained language models (LMs) advances their capability to handle specialised in-domain tasks such as biomedical entity linking (BEL). However, such abundant expert knowledge…

Computation and Language · Computer Science 2021-06-01 Fangyu Liu , Ivan Vulić , Anna Korhonen , Nigel Collier

Natural language processing (NLP) tasks (text classification, named entity recognition, etc.) have seen revolutionary improvements over the last few years. This is due to language models such as BERT that achieve deep knowledge transfer by…

Computation and Language · Computer Science 2021-05-27 Lee Burke , Karl Pazdernik , Daniel Fortin , Benjamin Wilson , Rustam Goychayev , John Mattingly

Recently, the pre-trained language model, BERT (and its robustly optimized version RoBERTa), has attracted a lot of attention in natural language understanding (NLU), and achieved state-of-the-art accuracy in various NLU tasks, such as…

Computation and Language · Computer Science 2019-09-30 Wei Wang , Bin Bi , Ming Yan , Chen Wu , Zuyi Bao , Jiangnan Xia , Liwei Peng , Luo Si

Pre-trained Language Models (LMs) have become an integral part of Natural Language Processing (NLP) in recent years, due to their superior performance in downstream applications. In spite of this resounding success, the usability of LMs is…

Computation and Language · Computer Science 2023-05-02 Mohammadmahdi Nouriborji , Omid Rohanian , Samaneh Kouchaki , David A. Clifton

In this work, we present an annotation framework that demonstrates how a multilingual LLM pretrained on a large corpus can be used as a teacher model to distill the expert knowledge needed for tagging medical texts in Polish. This work is…

Computation and Language · Computer Science 2026-05-19 Franciszek Górski , Andrzej Czyżewski

Bidirectional Encoder Representations from Transformers (BERT) has shown marvelous improvements across various NLP tasks, and consecutive variants have been proposed to further improve the performance of the pre-trained language models. In…

Computation and Language · Computer Science 2020-12-14 Yiming Cui , Wanxiang Che , Ting Liu , Bing Qin , Shijin Wang , Guoping Hu

Mental health challenges pose considerable global burdens on individuals and communities. Recent data indicates that more than 20% of adults may encounter at least one mental disorder in their lifetime. On the one hand, the advancements in…

Computation and Language · Computer Science 2024-02-05 Mihael Arcan , David-Paul Niland , Fionn Delahunty

In recent years, the integration of deep learning techniques into medical imaging has revolutionized the diagnosis and treatment of lung diseases, particularly in the context of COVID-19 and pneumonia. This paper presents a novel,…

Image and Video Processing · Electrical Eng. & Systems 2024-08-14 Md. Asiful Islam Miah , Shourin Paul , Sunanda Das , M. M. A. Hashem

Several recent works seek to develop foundation models specifically for medical applications, adapting general-purpose large language models (LLMs) and vision-language models (VLMs) via continued pretraining on publicly available biomedical…

Computation and Language · Computer Science 2024-11-21 Daniel P. Jeong , Saurabh Garg , Zachary C. Lipton , Michael Oberst

Since the inception of the Transformer architecture in 2017, Large Language Models (LLMs) such as GPT and BERT have evolved significantly, impacting various industries with their advanced capabilities in language understanding and…

Computation and Language · Computer Science 2024-05-30 Yining Huang , Keke Tang , Meilian Chen , Boyuan Wang

Contextual word embedding models such as ELMo (Peters et al., 2018) and BERT (Devlin et al., 2018) have dramatically improved performance for many natural language processing (NLP) tasks in recent months. However, these models have been…

Computation and Language · Computer Science 2019-06-24 Emily Alsentzer , John R. Murphy , Willie Boag , Wei-Hung Weng , Di Jin , Tristan Naumann , Matthew B. A. McDermott

Recent advances in large language models (LLMs) have shown impressive ability in biomedical question-answering, but have not been adequately investigated for more specific biomedical applications. This study investigates the performance of…

Computation and Language · Computer Science 2024-03-29 Shan Chen , Yingya Li , Sheng Lu , Hoang Van , Hugo JWL Aerts , Guergana K. Savova , Danielle S. Bitterman

The rise of digital misinformation has heightened interest in using multilingual Large Language Models (LLMs) for fact-checking. This study systematically evaluates translation bias and the effectiveness of LLMs for cross-lingual claim…

Computation and Language · Computer Science 2024-10-15 Aryan Singhal , Veronica Shao , Gary Sun , Ryan Ding , Jonathan Lu , Kevin Zhu

Extracting detailed clinical information from free-text medical narratives remains a practical challenge for researchers and healthcare systems. Terminology for immune-mediated and infectious diseases is especially inconsistent across…

Computation and Language · Computer Science 2026-05-29 Veysel Kocaman , Gursev Pirge , Yigit Gul , Ace Vo , Zhenya Nargizyan , David Talby

Language model pre-training has shown promising results in various downstream tasks. In this context, we introduce a cross-modal pre-trained language model, called Speech-Text BERT (ST-BERT), to tackle end-to-end spoken language…

Computation and Language · Computer Science 2021-04-13 Minjeong Kim , Gyuwan Kim , Sang-Woo Lee , Jung-Woo Ha

Lately, pre-trained language models advanced the field of natural language processing (NLP). The introduction of Bidirectional Encoders for Transformers (BERT) and its optimized version RoBERTa have had significant impact and increased the…

Computation and Language · Computer Science 2025-06-13 Raphael Scheible , Fabian Thomczyk , Patric Tippmann , Victor Jaravine , Martin Boeker