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Biomedical text mining is becoming increasingly important as the number of biomedical documents rapidly grows. With the progress in natural language processing (NLP), extracting valuable information from biomedical literature has gained…

Computation and Language · Computer Science 2019-10-21 Jinhyuk Lee , Wonjin Yoon , Sungdong Kim , Donghyeon Kim , Sunkyu Kim , Chan Ho So , Jaewoo Kang

Biomedical Named Entity Recognition (NER) is a fundamental task of Biomedical Natural Language Processing for extracting relevant information from biomedical texts, such as clinical records, scientific publications, and electronic health…

Computation and Language · Computer Science 2023-12-27 Fahime Shahrokh , Nasser Ghadiri , Rasoul Samani , Milad Moradi

The accurate interpretation of Electrocardiogram (ECG) signals is pivotal for diagnosing cardiovascular diseases. Integrating ECG signals with accompanying textual reports further holds immense potential to enhance clinical diagnostics by…

Machine Learning · Computer Science 2025-05-08 Hung Manh Pham , Aaqib Saeed , Dong Ma

Electrocardiograms (ECGs) provide non-invasive measurements of heart activity and are established tools for detecting cardiac arrhythmias. Although supervised machine learning has emerged as a promising approach for automated heartbeat…

Machine Learning · Computer Science 2026-04-27 Amir Reza Vazifeh , Jason W. Fleischer

Cardiovascular disease has become one of the most significant threats endangering human life and health. Recently, Electrocardiogram (ECG) monitoring has been transformed into remote cardiac monitoring by Holter surveillance. However, the…

Signal Processing · Electrical Eng. & Systems 2022-01-26 Peng Wang , Zihuai Lin , Xucun Yan , Zijiao Chen , Ming Ding , Yang Song , Lu Meng

Electrocardiogram (ECG) is a widely used reliable, non-invasive approach for cardiovascular disease diagnosis. With the rapid growth of ECG examinations and the insufficiency of cardiologists, accurate and automatic diagnosis of ECG signals…

Machine Learning · Computer Science 2020-10-21 Dongdong Zhang , Xiaohui Yuan , Ping Zhang

The electrocardiogram (ECG) is one of the most common primary tests to evaluate the health of the heart. Reliable automatic interpretation of ECG records is crucial to the goal of improving public health. It can enable a safe inexpensive…

Signal Processing · Electrical Eng. & Systems 2023-01-18 Laura Rebollo-Neira , Khalil Battikh , Amadou Sidi Watt

Objective: A novel structure based on channel-wise attention mechanism is presented in this paper. Embedding with the proposed structure, an efficient classification model that accepts multi-lead electrocardiogram (ECG) as input is…

Signal Processing · Electrical Eng. & Systems 2020-03-27 Hao Tung , Chao Zheng , Xinsheng Mao , Dahong Qian

Electrocardiograms (ECGs) have shown unique patterns to distinguish between different subjects and present important advantages compared to other biometric traits, such as difficulty to counterfeit, liveness detection, and ubiquity. Also,…

Machine Learning · Computer Science 2023-02-15 Pietro Melzi , Ruben Tolosana , Ruben Vera-Rodriguez

In the fields of brain-computer interaction and cognitive neuroscience, effective decoding of auditory signals from task-based functional magnetic resonance imaging (fMRI) is key to understanding how the brain processes complex auditory…

Neurons and Cognition · Quantitative Biology 2024-06-05 Wanli Ma , Xuegang Tang , Jin Gu , Ying Wang , Yuling Xia

BERT, which stands for Bidirectional Encoder Representations from Transformers, is a recently introduced language representation model based upon the transfer learning paradigm. We extend its fine-tuning procedure to address one of its…

Computation and Language · Computer Science 2019-10-25 Raghavendra Pappagari , Piotr Żelasko , Jesús Villalba , Yishay Carmiel , Najim Dehak

In this work we search for best practices in pre-processing of Electrocardiogram (ECG) signals in order to train better classifiers for the diagnosis of heart conditions. State of the art machine learning algorithms have achieved remarkable…

Signal Processing · Electrical Eng. & Systems 2025-05-16 Amir Salimi , Sunil Vasu Kalmady , Abram Hindle , Osmar Zaiane , Padma Kaul

Contextual word embedding models such as ELMo (Peters et al., 2018) and BERT (Devlin et al., 2018) have dramatically improved performance for many natural language processing (NLP) tasks in recent months. However, these models have been…

Computation and Language · Computer Science 2019-06-24 Emily Alsentzer , John R. Murphy , Willie Boag , Wei-Hung Weng , Di Jin , Tristan Naumann , Matthew B. A. McDermott

Recent advances have increasingly applied large language models (LLMs) to electrocardiogram (ECG) interpretation, giving rise to Electrocardiogram-Language Models (ELMs). Conditioned on an ECG and a textual query, an ELM autoregressively…

Artificial Intelligence · Computer Science 2025-05-27 William Han , Chaojing Duan , Zhepeng Cen , Yihang Yao , Xiaoyu Song , Atharva Mhaskar , Dylan Leong , Michael A. Rosenberg , Emerson Liu , Ding Zhao

With tens of thousands of electrocardiogram (ECG) records processed by mobile cardiac event recorders every day, heart rhythm classification algorithms are an important tool for the continuous monitoring of patients at risk. We utilise an…

Machine Learning · Computer Science 2020-12-14 Patrick Schwab , Gaetano Scebba , Jia Zhang , Marco Delai , Walter Karlen

In Natural Language Processing (NLP), Machine Reading Comprehension (MRC) is the task of answering a question based on a given context. To handle questions in the medical domain, modern language models such as BioBERT, SciBERT and even…

Computation and Language · Computer Science 2024-12-16 Saptarshi Sengupta , Connor Heaton , Suhan Cui , Soumalya Sarkar , Prasenjit Mitra

In this study, we introduce ExBEHRT, an extended version of BEHRT (BERT applied to electronic health records), and apply different algorithms to interpret its results. While BEHRT considers only diagnoses and patient age, we extend the…

Machine Learning · Computer Science 2023-08-14 Maurice Rupp , Oriane Peter , Thirupathi Pattipaka

Transformer-based language models such as BERT provide significant accuracy improvement for a multitude of natural language processing (NLP) tasks. However, their hefty computational and memory demands make them challenging to deploy to…

The classification of electrocardiographic (ECG) signals is a challenging problem for healthcare industry. Traditional supervised learning methods require a large number of labeled data which is usually expensive and difficult to obtain for…

Signal Processing · Electrical Eng. & Systems 2018-11-28 Xu Chen , Saratendu Sethi

The classification of electrocardiogram (ECG) plays a crucial role in the development of an automatic cardiovascular diagnostic system. However, considerable variances in ECG signals between individuals is a significant challenge. Changes…

Signal Processing · Electrical Eng. & Systems 2023-06-08 Md Niaz Imtiaz , Naimul Khan
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