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Large language models (LLMs) have shown remarkable capabilities in Natural Language Processing (NLP), especially in domains where labeled data is scarce or expensive, such as clinical domain. However, to unlock the clinical knowledge hidden…

Computation and Language · Computer Science 2023-09-18 Sonish Sivarajkumar , Mark Kelley , Alyssa Samolyk-Mazzanti , Shyam Visweswaran , Yanshan Wang

Large Language Models (LLMs) are increasingly adopted for applications in healthcare, reaching the performance of domain experts on tasks such as question answering and document summarisation. Despite their success on these tasks, it is…

Computation and Language · Computer Science 2025-05-20 Aishik Nagar , Viktor Schlegel , Thanh-Tung Nguyen , Hao Li , Yuping Wu , Kuluhan Binici , Stefan Winkler

Current Large Language Model (LLM) approaches for information extraction (IE) in the healthy food policy domain are often hindered by various factors, including misinformation, specifically hallucinations, misclassifications, and omissions…

Artificial Intelligence · Computer Science 2026-04-03 Congjing Zhang , Ruoxuan Bao , Jingyu Li , Yoav Ackerman , Shuai Huang , Yanfang Su

Large Language Models (LLMs) show remarkable potential for few-shot information extraction (IE), yet their performance is highly sensitive to the choice of in-context examples. Conventional selection strategies often fail to provide…

Computation and Language · Computer Science 2026-05-13 Dong Zhao , Yadong Wang , Xiang Chen , Chenxi Wang , Hongliang Dai , Chuanxing Geng , Shengzhong Zhang , Shaoyuan Li , Sheng-Jun Huang

Large language models (LLMs) are increasingly touted as powerful tools for automating scientific information extraction. However, existing methods and tools often struggle with the realities of scientific literature: long-context documents,…

Natural language processing (NLP) is a key technology to extract important patient information from clinical narratives to support healthcare applications. The rapid development of large language models (LLMs) has revolutionized many NLP…

Computation and Language · Computer Science 2025-09-08 Cheng Peng , Xinyu Dong , Mengxian Lyu , Daniel Paredes , Yaoyun Zhang , Yonghui Wu

We introduce a biomedical information extraction (IE) pipeline that extracts biological relationships from text and demonstrate that its components, such as named entity recognition (NER) and relation extraction (RE), outperform…

Machine Learning · Computer Science 2020-11-13 Jupinder Parmar , William Koehler , Martin Bringmann , Katharina Sophia Volz , Berk Kapicioglu

Large Language Models (LLMs) demonstrate exceptional performance in textual understanding and tabular reasoning tasks. However, their ability to comprehend and analyze hybrid text, containing textual and tabular data, remains unexplored.…

Computation and Language · Computer Science 2025-01-03 Chongjian Yue , Xinrun Xu , Xiaojun Ma , Lun Du , Zhiming Ding , Shi Han , Dongmei Zhang , Qi Zhang

The rapid advancement of large language models (LLMs) has opened new boundaries in the extraction and synthesis of medical knowledge, particularly within evidence synthesis. This paper reviews the state-of-the-art applications of LLMs in…

Recent research in information extraction (IE) focuses on utilizing code-style inputs to enhance structured output generation. The intuition behind this is that the programming languages (PLs) inherently exhibit greater structural…

Computation and Language · Computer Science 2025-05-23 Bo Li , Gexiang Fang , Wei Ye , Zhenghua Xu , Jinglei Zhang , Hao Cheng , Shikun Zhang

Open Information Extraction (OIE) aims to extract objective structured knowledge from natural texts, which has attracted growing attention to build dedicated models with human experience. As the large language models (LLMs) have exhibited…

Computation and Language · Computer Science 2023-10-17 Ji Qi , Kaixuan Ji , Xiaozhi Wang , Jifan Yu , Kaisheng Zeng , Lei Hou , Juanzi Li , Bin Xu

The interpretation of implicit meanings is an integral aspect of human communication. However, this framework may not transfer to interactions with Large Language Models (LLMs). To investigate this, we introduce the task of Implicit…

Computation and Language · Computer Science 2026-04-21 Antonio De Santis , Tommaso Bonetti , Andrea Tocchetti , Marco Brambilla

Large Language models (LLMs) have emerged as powerful tools for addressing challenges across diverse domains. Notably, recent studies have demonstrated that large language models significantly enhance the efficiency of biomolecular analysis…

Computation and Language · Computer Science 2025-03-07 Jiyue Jiang , Zikang Wang , Yuheng Shan , Heyan Chai , Jiayi Li , Zixian Ma , Xinrui Zhang , Yu Li

Document-level information extraction (IE) is a crucial task in natural language processing (NLP). This paper conducts a systematic review of recent document-level IE literature. In addition, we conduct a thorough error analysis with…

Computation and Language · Computer Science 2023-09-26 Hanwen Zheng , Sijia Wang , Lifu Huang

The increasing volume of scholarly publications requires advanced tools for efficient knowledge discovery and management. This paper introduces ongoing work on a system using Large Language Models (LLMs) for the semantic extraction of key…

Digital Libraries · Computer Science 2025-10-07 Samy Ateia , Udo Kruschwitz , Melanie Scholz , Agnes Koschmider , Moayad Almohaishi

Large Language Models (LLMs) have become powerful tools for annotating unstructured data. However, most existing workflows rely on ad hoc scripts, making reproducibility, robustness, and systematic evaluation difficult. To address these…

Information Retrieval · Computer Science 2025-09-26 Eric Fithian , Kirill Skobelev

The promise of data-driven materials discovery remains constrained by the scarcity of large, high-quality, and accessible experimental datasets. Here, we introduce a generalizable large language model (LLM)-powered pipeline for automated…

Materials Science · Physics 2026-04-28 Zhanzhao Li , Kengran Yang , Qiyao He , Kai Gong

Large Language Models (LLMs) have made remarkable strides in various tasks. Whether LLMs are competitive few-shot solvers for information extraction (IE) tasks, however, remains an open problem. In this work, we aim to provide a thorough…

Computation and Language · Computer Science 2024-04-15 Yubo Ma , Yixin Cao , YongChing Hong , Aixin Sun

With the advent of artificial intelligence (AI), many researchers are attempting to extract structured information from document-level biomedical literature by fine-tuning large language models (LLMs). However, they face significant…

Neural and Evolutionary Computing · Computer Science 2026-02-26 Lei Zhao , Ling Kang , Quan Guo

Developing a general-purpose extraction system that can extract events with massive types is a long-standing target in Event Extraction (EE). In doing so, the challenge comes from two aspects: 1) The absence of an efficient and effective…

Computation and Language · Computer Science 2025-03-05 Wenxuan Liu , Zixuan Li , Long Bai , Yuxin Zuo , Daozhu Xu , Xiaolong Jin , Jiafeng Guo , Xueqi Cheng