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To improve the robustness of graph neural networks (GNN), graph structure learning (GSL) has attracted great interest due to the pervasiveness of noise in graph data. Many approaches have been proposed for GSL to jointly learn a clean graph…

Machine Learning · Computer Science 2023-07-06 Shaogao Lv , Gang Wen , Shiyu Liu , Linsen Wei , Ming Li

Graph Structure Learning (GSL) has recently garnered considerable attention due to its ability to optimize both the parameters of Graph Neural Networks (GNNs) and the computation graph structure simultaneously. Despite the proliferation of…

Machine Learning · Computer Science 2023-10-10 Zhixun Li , Liang Wang , Xin Sun , Yifan Luo , Yanqiao Zhu , Dingshuo Chen , Yingtao Luo , Xiangxin Zhou , Qiang Liu , Shu Wu , Liang Wang , Jeffrey Xu Yu

Graph classification is an important area in both modern research and industry. Multiple applications, especially in chemistry and novel drug discovery, encourage rapid development of machine learning models in this area. To keep up with…

Machine Learning · Computer Science 2022-11-08 Jakub Adamczyk

Temporal Graph Learning, which aims to model the time-evolving nature of graphs, has gained increasing attention and achieved remarkable performance recently. However, in reality, graph structures are often incomplete and noisy, which…

Machine Learning · Computer Science 2023-08-16 Haozhen Zhang , Xueting Han , Xi Xiao , Jing Bai

Graph Neural Network (GNN) is an emerging technique for graph-based learning tasks such as node classification. In this work, we reveal the vulnerability of GNN to the imbalance of node labels. Traditional solutions for imbalanced…

Machine Learning · Computer Science 2022-02-08 Xiaohe Li , Lijie Wen , Yawen Deng , Fuli Feng , Xuming Hu , Lei Wang , Zide Fan

Graph classification is a significant problem in many scientific domains. It addresses tasks such as the classification of proteins and chemical compounds into categories according to their functions, or chemical and structural properties.…

Machine Learning · Computer Science 2019-02-25 Marcelo Daniel Gutierrez Mallea , Peter Meltzer , Peter J Bentley

Advanced graph neural networks have shown great potentials in graph classification tasks recently. Different from node classification where node embeddings aggregated from local neighbors can be directly used to learn node labels, graph…

Machine Learning · Computer Science 2022-03-16 Hao Jia , Junzhong Ji , Minglong Lei

Deep generative models (DGMs) for graphs achieve impressively high expressive power thanks to very efficient and scalable neural networks. However, these networks contain non-linearities that prevent analytical computation of many standard…

Machine Learning · Computer Science 2025-08-12 Martin Rektoris , Milan Papež , Václav Šmídl , Tomáš Pevný

Self-supervised heterogeneous graph learning (SHGL) has shown promising potential in diverse scenarios. However, while existing SHGL methods share a similar essential with clustering approaches, they encounter two significant limitations:…

Artificial Intelligence · Computer Science 2024-12-03 Yujie Mo , Zhihe Lu , Runpeng Yu , Xiaofeng Zhu , Xinchao Wang

Graph Neural Networks (GNNs) have demonstrated strong performance across tasks such as node classification, link prediction, and graph classification, but remain vulnerable to backdoor attacks that implant imperceptible triggers during…

Machine Learning · Computer Science 2025-12-16 Xiaobao Wang , Ruoxiao Sun , Yujun Zhang , Bingdao Feng , Dongxiao He , Luzhi Wang , Di Jin

Publishing graph data is widely desired to enable a variety of structural analyses and downstream tasks. However, it also potentially poses severe privacy leakage, as attackers may leverage the released graph data to launch attacks and…

Cryptography and Security · Computer Science 2025-07-31 Yucheng Wu , Yuncong Yang , Xiao Han , Leye Wang , Junjie Wu

Signed graphs model complex relationships through positive and negative edges, with widespread real-world applications. Given the sensitive nature of such data, selective removal mechanisms have become essential for privacy protection.…

Machine Learning · Computer Science 2025-11-19 Junpeng Zhao , Lin Li , Kaixi Hu , Kaize Shi , Jingling Yuan

Identifying critical nodes and links in graphs is a crucial task. These nodes/links typically represent critical elements/communication links that play a key role in a system's performance. However, a majority of the methods available in…

Social and Information Networks · Computer Science 2022-05-31 Sai Munikoti , Laya Das , Balasubramaniam Natarajan

The integration of multi-omic data is pivotal for understanding complex diseases, but its high dimensionality and noise present significant challenges. Graph Neural Networks (GNNs) offer a robust framework for analyzing large-scale…

Quantitative Methods · Quantitative Biology 2024-12-23 Heming Zhang , Di Huang , Yixin Chen , Fuhai Li

Spectral graph sparsification is a classical tool for reducing graph complexity while preserving Laplacian quadratic forms. In graph neural networks (GNNs), sparsification is often used to accelerate computation while maintaining predictive…

Machine Learning · Computer Science 2026-05-05 Sanjukta Krishnagopal

Memory-based Temporal Graph Neural Networks are powerful tools in dynamic graph representation learning and have demonstrated superior performance in many real-world applications. However, their node memory favors smaller batch sizes to…

Machine Learning · Computer Science 2023-07-18 Hongkuan Zhou , Da Zheng , Xiang Song , George Karypis , Viktor Prasanna

Graph Contrastive Learning (GCL) has emerged as a promising approach in the realm of graph self-supervised learning. Prevailing GCL methods mainly derive from the principles of contrastive learning in the field of computer vision: modeling…

Machine Learning · Computer Science 2023-08-03 Zhiyuan Ning , Pengfei Wang , Pengyang Wang , Ziyue Qiao , Wei Fan , Denghui Zhang , Yi Du , Yuanchun Zhou

Convolutional neural networks (CNNs) can be applied to graph similarity matching, in which case they are called graph CNNs. Graph CNNs are attracting increasing attention due to their effectiveness and efficiency. However, the existing…

Machine Learning · Computer Science 2017-12-12 Bo Wu , Yang Liu , Bo Lang , Lei Huang

Graph Neural Networks (GNNs) have emerged as a powerful tool for representation learning on graphs, but they often suffer from overfitting and label noise issues, especially when the data is scarce or imbalanced. Different from the paradigm…

Machine Learning · Computer Science 2023-12-15 Yifan Li , Zhen Tan , Kai Shu , Zongsheng Cao , Yu Kong , Huan Liu

Full-batch training on Graph Neural Networks (GNN) to learn the structure of large graphs is a critical problem that needs to scale to hundreds of compute nodes to be feasible. It is challenging due to large memory capacity and bandwidth…