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Respondent-Driven Sampling (RDS) is a form of link-tracing sampling, a sampling technique used for `hard-to-reach' populations that aims to leverage individuals' social relationships to reach potential participants. While the methodological…

We introduce an R package for fitting Stable Isotope Mixing Models (SIMMs) via both Markov chain Monte Carlo and Variational Bayes. The package is mainly used for estimating dietary contributions from food sources taken via measurements of…

Applications · Statistics 2023-06-14 Emma Govan , Andrew L. Jackson , Richard Inger , Stuart Bearhop , Andrew C. Parnell

In this paper we describe two bootstrap methods for massive data sets. Naive applications of common resampling methodology are often impractical for massive data sets due to computational burden and due to complex patterns of inhomogeneity.…

Applications · Statistics 2013-01-14 S. N. Lahiri , C. Spiegelman , J. Appiah , L. Rilett

Singular Spectrum Analysis (SSA) as a tool for analysis and forecasting of time series is considered. The main features of the Rssa package, which implements the SSA algorithms and methodology in R, are described and examples of its use are…

Methodology · Statistics 2015-03-20 Nina Golyandina , Anton Korobeynikov

Estimating the geographical range of a species from sparse observations is a challenging and important geospatial prediction problem. Given a set of locations where a species has been observed, the goal is to build a model to predict…

This contribution presents a guide to the R package multilevLCA, which offers a complete and innovative set of technical tools for the latent class analysis of single-level and multilevel categorical data. We describe the available model…

Computation · Statistics 2024-04-11 Johan Lyrvall , Roberto Di Mari , Zsuzsa Bakk , Jennifer Oser , Jouni Kuha

Reliable tools and software for penetrance (age-specific risk among those who carry a genetic variant) estimation are critical to improving clinical decision making and risk assessment for hereditary syndromes. We introduce penetrance, an…

Computation · Statistics 2025-03-28 Nicolas Kubista , Danielle Braun , Giovanni Parmigiani

In this paper we address the challenging problem of multiple source localization in Wireless Sensor Networks (WSN). We develop an efficient statistical algorithm, based on the novel application of Sequential Monte Carlo (SMC) sampler…

Information Theory · Computer Science 2015-04-23 Thi Le Thu Nguyen , Francois Septier , Harizo Rajaona , Gareth W. Peters , Ido Nevat , Yves Delignon

We introduce BayesChange, a computationally efficient R package, built on C++, for Bayesian change point detection and clustering of observations sharing common change points. While many R packages exist for change point analysis,…

Computation · Statistics 2025-11-10 Luca Danese , Riccardo Corradin , Andrea Ongaro

Spatial transcriptomics (ST) is an emerging technology that enables researchers to investigate the molecular relationships underlying tissue morphology. However, acquiring ST data remains prohibitively expensive, and traditional fixed-grid…

Computer Vision and Pattern Recognition · Computer Science 2026-02-03 Junchao Zhu , Ruining Deng , Junlin Guo , Tianyuan Yao , Chongyu Qu , Juming Xiong , Siqi Lu , Zhengyi Lu , Yanfan Zhu , Marilyn Lionts , Yuechen Yang , Yalin Zheng , Yu Wang , Shilin Zhao , Haichun Yang , Yuankai Huo

Combining data from various sources empowers researchers to explore innovative questions, for example those raised by conducting healthcare monitoring studies. However, the lack of a unique identifier often poses challenges. Record linkage…

Methodology · Statistics 2025-09-16 Kayané Robach , Stéphanie L van der Pas , Mark A van de Wiel , Michel H Hof

When randomized ensemble methods such as bagging and random forests are implemented, a basic question arises: Is the ensemble large enough? In particular, the practitioner desires a rigorous guarantee that a given ensemble will perform…

Machine Learning · Statistics 2019-08-06 Miles E. Lopes , Suofei Wu , Thomas C. M. Lee

Most sampling techniques for online social networks (OSNs) are based on a particular sampling method on a single graph, which is referred to as a statistics. However, various realizing methods on different graphs could possibly be used in…

Social and Information Networks · Computer Science 2015-12-21 Xin Wang , Richard T. B. Ma , Yinlong Xu , Zhipeng Li

We introduce random survival forests, a random forests method for the analysis of right-censored survival data. New survival splitting rules for growing survival trees are introduced, as is a new missing data algorithm for imputing missing…

Applications · Statistics 2008-11-12 Hemant Ishwaran , Udaya B. Kogalur , Eugene H. Blackstone , Michael S. Lauer

A new approach to estimate population size based on a stratified link-tracing sampling design is presented. The method extends on the Frank and Snijders (1994) approach by allowing for heterogeneity in the initial sample selection…

Methodology · Statistics 2017-09-25 Kyle Vincent

The interpretation of count data originating from the current generation of DNA sequencing platforms requires special attention. In particular, the per-sample library sizes often vary by orders of magnitude from the same sequencing run, and…

Quantitative Methods · Quantitative Biology 2015-06-17 Paul J. McMurdie , Susan Holmes

This study introduces a novel methodology for mapping scientific communities at scale, addressing challenges associated with network analysis in large bibliometric datasets. By leveraging enriched publication metadata from the French…

Digital Libraries · Computer Science 2025-01-20 Victor Barbier , Eric Jeangirard

Survival data is encountered in a range of disciplines, most notably health and medical research. Although Bayesian approaches to the analysis of survival data can provide a number of benefits, they are less widely used than classical (e.g.…

Computation · Statistics 2020-02-25 Samuel L. Brilleman , Eren M. Elci , Jacqueline Buros Novik , Rory Wolfe

Scene coordinates regression (SCR), i.e., predicting 3D coordinates for every pixel of a given image, has recently shown promising potential. However, existing methods remain limited to small scenes memorized during training, and thus…

Computer Vision and Pattern Recognition · Computer Science 2023-12-01 Jerome Revaud , Yohann Cabon , Romain Brégier , JongMin Lee , Philippe Weinzaepfel

Big data sets must be carefully partitioned into statistically similar data subsets that can be used as representative samples for big data analysis tasks. In this paper, we propose the random sample partition (RSP) data model to represent…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-11 Salman Salloum , Yulin He , Joshua Zhexue Huang , Xiaoliang Zhang , Tamer Z. Emara , Chenghao Wei , Heping He