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Conducting research often involves managing multiple disconnected tools for survey design, data collection, response analysis, and report generation, leading to inefficiencies, increased error risks, and challenges in ensuring…

Computation · Statistics 2025-08-11 Clievins Selva

Population size estimation based on two sample capture-recapture type experiment is an interesting problem in various fields including epidemiology, pubic health, population studies, etc. The Lincoln-Petersen estimate is popularly used…

Methodology · Statistics 2019-01-21 Kiranmoy Chatterjee , Prajamitra Bhuyan

The following paper presents nonprobsvy -- an R package for inference based on non-probability samples. The package implements various approaches that can be categorized into three groups: prediction-based approach, inverse probability…

Methodology · Statistics 2025-08-21 Łukasz Chrostowski , Piotr Chlebicki , Maciej Beręsewicz

In this paper, we address the challenge of sampling in scenarios where limited resources prevent exhaustive measurement across all subjects. We consider a setting where samples are drawn from multiple groups, each following a distribution…

Econometrics · Economics 2024-08-29 Carol Liu

Density dependence occurs at the individual level and thus is greatly influenced by spatial local heterogeneity in habitat conditions. However, density dependence is often evaluated at the population level, leading to difficulties or even…

Populations and Evolution · Quantitative Biology 2025-11-20 Qing Zhao , Yunyi Shen

We propose a modern method to estimate population size based on capture-recapture designs of K samples. The observed data is formulated as a sample of n i.i.d. K-dimensional vectors of binary indicators, where the k-th component of each…

In the context of paid research studies and clinical trials, budget considerations often require patient sampling from available populations which comes with inherent constraints. We introduce the R package CDsampling, which is the first to…

Computation · Statistics 2025-09-30 Yifei Huang , Liping Tong , Jie Yang

This work is concerned with the estimation of hard-to-reach population sizes using a single respondent-driven sampling (RDS) survey, a variant of chain-referral sampling that leverages social relationships to reach members of a hidden…

Plant-capture is a variant of classical capture-recapture methods used to estimate the size of a population. In this method, decoys referred to as "plants" are introduced into the population in order to estimate the capture probability. The…

Methodology · Statistics 2025-06-25 Yiran Wang , Martin Lysy , Audrey Béliveau

The establishment of bioRxiv facilitated the rapid adoption of preprints in the life sciences, accelerating the dissemination of new research findings. However, the sheer volume of preprints published daily can be overwhelming, making it…

Other Quantitative Biology · Quantitative Biology 2024-08-22 Stephen D. Turner

Accurate sample classification using transcriptomics data is crucial for advancing personalized medicine. Achieving this goal necessitates determining a suitable sample size that ensures adequate statistical power without undue resource…

Methodology · Statistics 2024-09-11 Yunhui Qi , Xinyi Wang , Li-Xuan Qin

Monitoring key elements of disease dynamics (e.g., prevalence, case counts) is of great importance in infectious disease prevention and control, as emphasized during the COVID-19 pandemic. To facilitate this effort, we propose a new…

Methodology · Statistics 2024-10-10 Lin Ge , Yuzi Zhang , Lance A. Waller , Robert H. Lyles

Time series segmentation aims to identify potential change-points in a sequence of temporally dependent data, so that the original sequence can be partitioned into several homogeneous subsequences. It is useful for modeling and predicting…

Computation · Statistics 2024-04-12 Shubo Sun , Zifeng Zhao , Feiyu Jiang , Xiaofeng Shao

While non-invasive sampling is more and more commonly used in capture-recapture (CR) experiments, it carries a higher risk of misidentifications than direct observations. As a consequence, one must screen the data to retain only the…

Quantitative Methods · Quantitative Biology 2023-04-04 Rémi Fraysse , Rémi Choquet , Carlo Costantini , Roger Pradel

The R package SamplingStrata was developed in 2011 as an instrument to optimize the design of stratified samples. The optimization is performed by considering the stratification variables available in the sampling frame, and the precision…

Methodology · Statistics 2020-04-21 Marco Ballin , Giulio Barcaroli

Population size estimation based on the capture-recapture experiment is an interesting problem in various fields including epidemiology, criminology, demography, etc. In many real-life scenarios, there exists inherent heterogeneity among…

Methodology · Statistics 2023-08-01 Kiranmoy Chatterjee , Prajamitra Bhuyan

The R Package IBMPopSim aims to simulate the random evolution of heterogeneous populations using stochastic Individual-Based Models (IBMs). The package enables users to simulate population evolution, in which individuals are characterized…

Populations and Evolution · Quantitative Biology 2024-02-28 Daphné Giorgi , Sarah Kaakai , Vincent Lemaire

In this paper, we describe the software implementation of the methodological framework designed to incorporate mobile phone data into the current production chain of official statistics during the ESSnet Big Data II project. We present an…

Mathematical Software · Computer Science 2021-11-10 Bogdan Oancea , David Salgado , Luis Sanguiao Sande , Sandra Barragan

This paper develops a variance estimation framework for matching estimators that enables valid population inference for treatment effects. We provide theoretical analysis of a variance estimator that addresses key limitations in the…

Methodology · Statistics 2025-06-16 Xiang Meng , Aaron Smith , Luke Miratrix

Traditional regression models assume stationary relationships between predictors and responses, failing to capture the spatial heterogeneity present in many environmental, epidemiological, and ecological processes. To address this…

Methodology · Statistics 2025-05-27 Justice Akuoko-Frimpong , Edward Shao , Jonathan Ta