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Organisms result from adaptive processes interacting across different time scales. One such interaction is that between development and evolution. Models have shown that development sweeps over several traits in a single agent, sometimes…

Populations and Evolution · Quantitative Biology 2018-09-19 Sam Kriegman , Nick Cheney , Josh Bongard

The tempo and mode of an adaptive process is strongly determined by the structure of the fitness landscape that underlies it. In order to be able to predict evolutionary outcomes (even on the short term), we must know more about the nature…

Populations and Evolution · Quantitative Biology 2013-02-28 Bjørn Østman , Christoph Adami

Regular patterns of vegetation are considered widespread landscapes, although their global extent has never been estimated. Among them, spotted landscapes are of particular interest in the context of climate change. Indeed, regularly spaced…

Computer Vision and Pattern Recognition · Computer Science 2024-09-04 Baki Uzun , Shivam Pande , Gwendal Cachin-Bernard , Minh-Tan Pham , Sébastien Lefèvre , Rumais Blatrix , Doyle McKey

Latent world models allow agents to reason about complex environments with high-dimensional observations. However, adapting to new environments and effectively leveraging previous knowledge remain significant challenges. We present…

Machine Learning · Computer Science 2022-06-23 Anson Lei , Bernhard Schölkopf , Ingmar Posner

This paper introduces a modular processing chain to derive global high-resolution maps of leaf traits. In particular, we present global maps at 500 m resolution of specific leaf area, leaf dry matter content, leaf nitrogen and phosphorus…

Addressing the need for explainable Machine Learning has emerged as one of the most important research directions in modern Artificial Intelligence (AI). While the current dominant paradigm in the field is based on black-box models,…

Neural and Evolutionary Computing · Computer Science 2022-08-29 Andrea Ferigo , Leonardo Lucio Custode , Giovanni Iacca

Mutualistic networks have been shown to involve complex patterns of interactions among animal and plant species. The architecture of these webs seems to pervade some of their robust and fragile behaviour. Recent work indicates that there is…

Populations and Evolution · Quantitative Biology 2016-12-07 Sergi Valverde , Jose Montoya , Lucas Joppa , Ricard Sole

We study a version of the Tangled Nature model of evolutionary ecology redefined in a phenotype space where mutants have properties correlated to their parents. The model has individual-based dynamics whilst incorporating species scale…

Populations and Evolution · Quantitative Biology 2016-09-08 Simon Laird , Henrik Jeldtoft Jensen

The myriad microscopic interactions among the individual organisms that constitute an ecological system collectively give rise, at the macroscopic scale, to evolutionary trends. The ability to detect the directionality of such trends is…

Populations and Evolution · Quantitative Biology 2025-07-21 Andrea Marchetti , Henrik Jeldtoft Jensen

Evolution has fascinated quantitative and physical scientists for decades: how can the random process of mutation, recombination, and duplication of genetic information generate the diversity of life? What determines the rate of evolution?…

Populations and Evolution · Quantitative Biology 2018-04-23 Richard A. Neher , Aleksandra M. Walczak

Modeling environmental ecosystems is critical for the sustainability of our planet, but is extremely challenging due to the complex underlying processes driven by interactions amongst a large number of physical variables. As many variables…

Machine Learning · Computer Science 2025-10-13 Shiyuan Luo , Juntong Ni , Shengyu Chen , Runlong Yu , Yiqun Xie , Licheng Liu , Zhenong Jin , Huaxiu Yao , Xiaowei Jia

Knowledge about the hidden factors that determine particular system dynamics is crucial for both explaining them and pursuing goal-directed interventions. Inferring these factors from time series data without supervision remains an open…

Climate change affects occurrences of floods and droughts worldwide. However, predicting climate impacts over individual watersheds is difficult, primarily because accurate hydrological forecasts require models that are calibrated to past…

Machine Learning · Computer Science 2019-12-02 Frederik Kratzert , Daniel Klotz , Johannes Brandstetter , Pieter-Jan Hoedt , Grey Nearing , Sepp Hochreiter

In this work, we aim to formalize a novel scientific machine learning framework to reconstruct the hidden dynamics of the transmission rate, whose inaccurate extrapolation can significantly impair the quality of the epidemic forecasts, by…

Quantitative Methods · Quantitative Biology 2024-10-16 Giovanni Ziarelli , Stefano Pagani , Nicola Parolini , Francesco Regazzoni , Marco Verani

Due to the conventional distinction between ecological (rapid) and evolutionary (slow)timescales, ecological and population models to date have typically ignored the effects of evolution. Yet the potential for rapid evolutionary change has…

Populations and Evolution · Quantitative Biology 2012-11-20 Laura E. Jones , Stephen P. Ellner

Accurate prediction of atmospheric optical turbulence in localized environments is essential for estimating the performance of free-space optical systems. Macro-meteorological models developed to predict turbulent effects in one environment…

Atmospheric and Oceanic Physics · Physics 2023-10-30 Christopher Jellen , Charles Nelson , John Burkhardt , Cody Brownell

The potential for complex systems to exhibit tipping points in which an equilibrium state undergoes a sudden and often irreversible shift is well established, but prediction of these events using standard forecast modeling techniques is…

Atmospheric and Oceanic Physics · Physics 2022-12-07 Daniel Dylewsky , Timothy M. Lenton , Marten Scheffer , Thomas M. Bury , Christopher G. Fletcher , Madhur Anand , Chris T. Bauch

The automatic design of robots has existed for 30 years but has been constricted by serial non-differentiable design evaluations, premature convergence to simple bodies or clumsy behaviors, and a lack of sim2real transfer to physical…

Robotics · Computer Science 2024-05-28 Luke Strgar , David Matthews , Tyler Hummer , Sam Kriegman

Due to climate-induced changes, many habitats are experiencing range shifts away from their traditional geographic locations (Piguet, 2011). We propose a solution to accurately model whether bird species are present in a specific habitat…

Artificial Intelligence · Computer Science 2025-07-16 Emir Durakovic , Min-Hong Shih

Patterns in a semiarid ecosystem are important because they directly and indirectly affect ecological processes, biodiversity, and ecosystem resilience. Understanding the causes and effects of these patterns is critical for long-term land…

Populations and Evolution · Quantitative Biology 2023-12-05 Swadesh Pal , Malay Banerjee , Roderick Melnik