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The autonomous synthesis of deep research reports represents a critical frontier for Large Language Models (LLMs), demanding sophisticated information orchestration and non-linear narrative logic. Current approaches rely on rigid predefined…

Multiagent Systems · Computer Science 2026-04-22 Kuo Tian , Pengfei Sun , Zhen Wu , Junran Ding , Xinyu Dai

In order to automate AI research we introduce a full, end-to-end framework, OMEGA: Optimizing Machine learning by Evaluating Generated Algorithms, that starts at idea generation and ends with executable code. Our system combines structured…

Artificial Intelligence · Computer Science 2026-04-30 Jeremy Nixon , Annika Singh

Large pre-trained language models such as GPT-3, Codex, and Google's language model are now capable of generating code from natural language specifications of programmer intent. We view these developments with a mixture of optimism and…

Software Engineering · Computer Science 2021-12-07 Naman Jain , Skanda Vaidyanath , Arun Iyer , Nagarajan Natarajan , Suresh Parthasarathy , Sriram Rajamani , Rahul Sharma

Scientific advancement relies on the ability to share and reproduce results. When data analysis or calculations are carried out using software written by scientists there are special challenges around code versions, quality and code…

Software Engineering · Computer Science 2025-07-09 S. Lee , C. Myers , A. Yang , T. Zhang , S. J. L. Billinge

Bayesian models of cognition have gained considerable traction in computational neuroscience and psychiatry. Their scopes are now expected to expand rapidly to artificial intelligence, providing general inference frameworks to support…

Neural and Evolutionary Computing · Computer Science 2025-08-07 Nicolas Legrand , Lilian Weber , Peter Thestrup Waade , Anna Hedvig Møller Daugaard , Mojtaba Khodadadi , Nace Mikuš , Chris Mathys

Users in many domains use machine learning (ML) predictions to help them make decisions. Effective ML-based decision-making often requires explanations of ML models and their predictions. While there are many algorithms that explain models,…

Machine Learning · Computer Science 2023-12-21 Alexandra Zytek , Wei-En Wang , Dongyu Liu , Laure Berti-Equille , Kalyan Veeramachaneni

Large Language Models (LLMs) represent a leap in artificial intelligence, excelling in tasks using human language(s). Although the main focus of general-purpose LLMs is not code generation, they have shown promising results in the domain.…

Software Engineering · Computer Science 2024-01-30 Sanka Rasnayaka , Guanlin Wang , Ridwan Shariffdeen , Ganesh Neelakanta Iyer

Academic writing is an indispensable yet laborious part of the research enterprise. This Perspective maps out principles and methods for using generative artificial intelligence (AI), specifically large language models (LLMs), to elevate…

Computers and Society · Computer Science 2026-04-07 Zhicheng Lin

In this paper, we propose a novel end-to-end approach for AI-assisted code completion called Pythia. It generates ranked lists of method and API recommendations which can be used by software developers at edit time. The system is currently…

Software Engineering · Computer Science 2019-12-03 Alexey Svyatkovskiy , Ying Zhao , Shengyu Fu , Neel Sundaresan

We present an expository overview of technical and cultural challenges to the development and adoption of automation at various stages in the data science prediction lifecycle, restricting focus to supervised learning with structured…

Machine Learning · Computer Science 2022-08-26 Nicholas Hoell

BasisGen is a Python package for the automatic generation of bases of operators in effective field theories. It accepts any semisimple symmetry group and fields in any of its finite dimensional irreducible representations. It takes into…

High Energy Physics - Phenomenology · Physics 2019-05-01 Juan Carlos Criado

The objective of this research is to analyse the ways members of open-source software communities participate in design. In particular we focus on how users of an Open Source (OS) programming language (Python) participate in adding new…

Human-Computer Interaction · Computer Science 2016-08-16 Flore Barcellini , Françoise Détienne , Jean-Marie Burkhardt

Active inference is an account of cognition and behavior in complex systems which brings together action, perception, and learning under the theoretical mantle of Bayesian inference. Active inference has seen growing applications in…

Artificial Intelligence · Computer Science 2022-05-06 Conor Heins , Beren Millidge , Daphne Demekas , Brennan Klein , Karl Friston , Iain Couzin , Alexander Tschantz

Running complex sets of machine learning experiments is challenging and time-consuming due to the lack of a unified framework. This leaves researchers forced to spend time implementing necessary features such as parallelization, caching,…

Machine Learning · Computer Science 2023-11-22 Zac Pullar-Strecker , Xinglong Chang , Liam Brydon , Ioannis Ziogas , Katharina Dost , Jörg Wicker

The purpose of this paper is to show how existing scientific software can be parallelized using a separate thin layer of Python code where all parallel communication is implemented. We provide specific examples on such layers of code, and…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-05-18 Jon K. Nilsen , Xing Cai , Bjorn Hoyland , Hans Petter Langtangen

A large number of computational scientific research projects make use of open source software packages. However, the development process of such tools frequently differs from conventional software development; partly because of the nature…

Software Engineering · Computer Science 2013-09-24 Ivan Girotto , Axel Kohlmeyer , David Grellscheid , Shawn T. Brown

This research addresses the challenges inherent in developing Artificial Intelligence (AI) applications, particularly those leveraging Large Language Models (LLMs). While AI vendors provide Application Programming Interfaces (APIs) and…

Artificial Intelligence · Computer Science 2026-05-20 Chun-Hsiung Tseng , Hao-Chiang Koong Lin , Andrew Chih-Wei Huang , Yung-Hui Chen , Jia-Rou Lin

Program synthesis strives to generate a computer program as a solution to a given problem specification, expressed with input-output examples or natural language descriptions. The prevalence of large language models advances the…

Machine Learning · Computer Science 2023-03-01 Erik Nijkamp , Bo Pang , Hiroaki Hayashi , Lifu Tu , Huan Wang , Yingbo Zhou , Silvio Savarese , Caiming Xiong

Recent advances in Machine Learning (ML) have produced models that extract structured information from complex data. However, a significant challenge lies in translating these perceptual or extractive outputs into actionable and explainable…

Machine Learning · Computer Science 2026-01-08 Dyuman Aditya , Colton Payne , Mario Leiva , Paulo Shakarian

The LLM Agent, equipped with a code interpreter, is capable of automatically solving real-world coding tasks, such as data analysis and image editing. However, existing benchmarks primarily focus on either simplistic tasks, such as…

Software Engineering · Computer Science 2024-08-06 Yaolun Zhang , Yinxu Pan , Yudong Wang , Jie Cai
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