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We present an easy-to-use, Python-based framework that allows a researcher to automate their computational simulations. In particular the framework facilitates assembling several long-running computations and producing various plots from…

Other Computer Science · Computer Science 2018-11-30 Prabhu Ramachandran

In recent years, the research community has raised serious questions about the reproducibility of scientific work. In particular, since many studies include some kind of computing work, reproducibility is also a technological challenge, not…

Software Engineering · Computer Science 2023-08-03 Lázaro Costa , Susana Barbosa , Jácome Cunha

In this paper, we introduce SciGen, a new challenge dataset for the task of reasoning-aware data-to-text generation consisting of tables from scientific articles and their corresponding descriptions. Describing scientific tables goes beyond…

Computation and Language · Computer Science 2021-04-20 Nafise Sadat Moosavi , Andreas Rücklé , Dan Roth , Iryna Gurevych

Software development is a complex, multi-phase process traditionally requiring collaboration among individuals with diverse expertise. We propose AgentMesh, a Python-based framework that uses multiple cooperating LLM-powered agents to…

Software Engineering · Computer Science 2025-07-29 Sourena Khanzadeh

We describe how Python can be leveraged to streamline the curation, modelling and dissemination of drug discovery data as well as the development of innovative, freely available tools for the related scientific community. We look at various…

Other Computer Science · Computer Science 2016-07-05 Michał Nowotka , George Papadatos , Mark Davies , Nathan Dedman , Anne Hersey

We introduce Texygen, a benchmarking platform to support research on open-domain text generation models. Texygen has not only implemented a majority of text generation models, but also covered a set of metrics that evaluate the diversity,…

Computation and Language · Computer Science 2018-02-07 Yaoming Zhu , Sidi Lu , Lei Zheng , Jiaxian Guo , Weinan Zhang , Jun Wang , Yong Yu

Large language models (LLMs) have demonstrated significant advancements in reasoning and code generation, but efficiently creating new benchmarks to evaluate these capabilities remains a challenge. Traditional benchmark creation relies on…

Computation and Language · Computer Science 2026-05-27 Ishir Garg , Neel Kolhe , Xuandong Zhao , Dawn Song

OpenML is an online platform for open science collaboration in machine learning, used to share datasets and results of machine learning experiments. In this paper we introduce OpenML-Python, a client API for Python, opening up the OpenML…

Generating novel and creative scientific hypotheses is a cornerstone in achieving Artificial General Intelligence. Large language and reasoning models have the potential to aid in the systematic creation, selection, and validation of…

Computation and Language · Computer Science 2025-04-18 Charles O'Neill , Tirthankar Ghosal , Roberta Răileanu , Mike Walmsley , Thang Bui , Kevin Schawinski , Ioana Ciucă

In today's software world with its cornucopia of reusable software libraries, when a programmer is faced with a programming task that they suspect can be completed through the use of a library, they often look for code examples using a…

Software Engineering · Computer Science 2021-10-08 Geert Heyman , Rafael Huysegems , Pascal Justen , Tom Van Cutsem

Bayesian Networks (BNs) are used in various fields for modeling, prediction, and decision making. pgmpy is a python package that provides a collection of algorithms and tools to work with BNs and related models. It implements algorithms for…

Machine Learning · Computer Science 2023-04-19 Ankur Ankan , Johannes Textor

Despite the explosion of interest in healthcare AI research, the reproducibility and benchmarking of those research works are often limited due to the lack of standard benchmark datasets and diverse evaluation metrics. To address this…

Machine Learning · Computer Science 2021-01-13 Yue Zhao , Zhi Qiao , Cao Xiao , Lucas Glass , Jimeng Sun

Artificial intelligence (AI) is increasingly central to understanding how the brain processes information. However, the integration of neuroscience and modern AI is bottlenecked by a fragmented software ecosystem. Current tools are siloed…

State-of-the-art visual generative AI tools hold immense potential to assist users in the early ideation stages of creative tasks -- offering the ability to generate (rather than search for) novel and unprecedented (instead of existing)…

Computer Vision and Pattern Recognition · Computer Science 2025-09-05 Evans Xu Han , Alice Qian Zhang , Haiyi Zhu , Hong Shen , Paul Pu Liang , Jane Hsieh

In recent years, data has emerged as the new gold, serving as a powerful tool for creating intelligent systems. However, procuring high-quality data remains challenging, especially for code. To address this, we developed TinyPy Generator, a…

Programming Languages · Computer Science 2024-03-12 Kamel Yamani , Marwa Naïr , Riyadh Baghdadi

Human-AI co-creativity represents a transformative shift in how humans and generative AI tools collaborate in creative processes. This chapter explores the synergies between human ingenuity and AI capabilities across four levels of…

Human-Computer Interaction · Computer Science 2025-11-27 Jennifer Haase , Sebastian Pokutta

Language agents show potential in being capable of utilizing natural language for varied and intricate tasks in diverse environments, particularly when built upon large language models (LLMs). Current language agent frameworks aim to…

Dynamically typed languages such as Python have become very popular. Among other strengths, Python's dynamic nature and its straightforward linking to native code have made it the de-facto language for many research areas such as Artificial…

Programming Languages · Computer Science 2023-01-13 Wenting Zhao , Ibrahim Abdelaziz , Julian Dolby , Kavitha Srinivas , Mossad Helali , Essam Mansour

Automatic research with Large Language Models (LLMs) is rapidly gaining importance, driving the development of increasingly complex workflows involving multi-agent systems, planning, tool usage, code execution, and human-agent interaction…

Computation and Language · Computer Science 2025-10-09 Haofei Yu , Keyang Xuan , Fenghai Li , Kunlun Zhu , Zijie Lei , Jiaxun Zhang , Ziheng Qi , Kyle Richardson , Jiaxuan You

Compound AI systems, orchestrating multiple AI components and external APIs, are increasingly vital but face challenges in managing complexity, handling ambiguity, and enabling effective development workflows. Existing frameworks often…

Artificial Intelligence · Computer Science 2025-04-08 Helena Zhang , Jakobi Haskell , Yosef Frost