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The Transformer architecture has revolutionized artificial intelligence, yet a principled theoretical understanding of its internal mechanisms remains elusive. This paper introduces a novel analytical framework that reconceptualizes the…

Machine Learning · Computer Science 2025-09-30 Yukun Zhang , Xueqing Zhou

In transformer architectures, position encoding primarily provides a sense of sequence for input tokens. While the original transformer paper's method has shown satisfactory results in general language processing tasks, there have been new…

Computation and Language · Computer Science 2024-03-26 Eren Unlu

Standard Transformers excel at semantic modeling but struggle with rigid sequential logic and state tracking. Theoretical work establishes that self-attention is limited to $\AC^0$ (under hard attention) or $\TC^0$ (under soft attention),…

Machine Learning · Computer Science 2026-02-10 Mehryar Mohri

Position encoding is the primary mechanism which induces notion of sequential order for input tokens in transformer architectures. Even though this formulation in the original transformer paper has yielded plausible performance for general…

Computation and Language · Computer Science 2023-10-10 Eren Unlu

Topology optimization enables the design of highly efficient and complex structures, but conventional iterative methods, such as SIMP-based approaches, often suffer from high computational costs and sensitivity to initial conditions.…

Computational Engineering, Finance, and Science · Computer Science 2025-09-18 Aaron Lutheran , Srijan Das , Alireza Tabarraei

We propose a novel positional encoding for learning graph on Transformer architecture. Existing approaches either linearize a graph to encode absolute position in the sequence of nodes, or encode relative position with another node using…

Machine Learning · Computer Science 2022-10-17 Wonpyo Park , Woonggi Chang , Donggeon Lee , Juntae Kim , Seung-won Hwang

Positional encoding plays a pivotal role in determin?ing the extrapolation and generalization performance of wireless foundation models for channel state information (CSI) modeling, latent characterization, and task-specific prediction.…

Signal Processing · Electrical Eng. & Systems 2026-05-05 Chenyu Zhang , Xinchen Lyu , Chenshan Ren , Shuhan Liu , Qimei Cui

We study the extent to which rotary position encodings (RoPE), a recent transformer position encoding algorithm broadly adopted in large language models (LLMs) and vision transformers (ViTs), can be applied to graph-structured data. We find…

We prove under practical assumptions that Rotary Positional Embedding (RoPE) introduces an intrinsic distance-dependent bias in attention scores that limits RoPE's ability to model long-context. RoPE extension methods may alleviate this…

Computation and Language · Computer Science 2026-05-12 Yu Wang , Sheng Shen , Rémi Munos , Hongyuan Zhan , Yuandong Tian

Topology optimization is used for the design of high-performance structures but remains fundamentally limited by its iterative nature, requiring repeated finite element analyses that prevent real-time deployment and large-scale design…

Computational Engineering, Finance, and Science · Computer Science 2026-04-07 Aaron Lutheran , Srijan Das , Alireza Tabarraei

Transformer-based large language models exhibit groundbreaking capabilities, but their storage and computational costs are prohibitively high, limiting their application in resource-constrained scenarios. An effective approach is to…

Machine Learning · Computer Science 2024-12-18 Jing Zhang , Shuzhen Sun , Peng Zhang , Guangxing Cao , Hui Gao , Xindian Ma , Nan Xu , Yuexian Hou

Transformer models rely on High-Performance Computing (HPC) resources for inference, where soft errors are inevitable in large-scale systems, making the reliability of the model particularly critical. Existing fault tolerance frameworks for…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-08-14 Huangliang Dai , Shixun Wu , Jiajun Huang , Zizhe Jian , Yue Zhu , Haiyang Hu , Zizhong Chen

We revisit evaluation of logical formulas that allow both uninterpreted relations, constrained to be finite, as well as an interpreted vocabulary over an infinite domain. This formalism was denoted embedded finite model theory in the past.…

Logic in Computer Science · Computer Science 2024-05-22 Michael Benedikt , Ehud Hrushovski

We introduce a novel positional encoding strategy for Transformer-style models, addressing the shortcomings of existing, often ad hoc, approaches. Our framework provides a flexible mapping from the algebraic specification of a domain to an…

Machine Learning · Computer Science 2024-11-01 Konstantinos Kogkalidis , Jean-Philippe Bernardy , Vikas Garg

Rotary Positional Encodings (RoPE) have emerged as a highly effective technique for one-dimensional sequences in Natural Language Processing spurring recent progress towards generalizing RoPE to higher-dimensional data such as images and…

Computer Vision and Pattern Recognition · Computer Science 2025-11-12 Chase van de Geijn , Timo Lüddecke , Polina Turishcheva , Alexander S. Ecker

It has been observed that transformers with greater depth (that is, more layers) have more capabilities, but can we establish formally which capabilities are gained? We answer this question with a theoretical proof followed by an empirical…

Computation and Language · Computer Science 2026-01-21 Andy Yang , Michaël Cadilhac , David Chiang

Extending the context length of Language Models (LMs) by improving Rotary Position Embedding (RoPE) has become a trend. While prior works mainly address RoPE's limitations within attention, this paper uncovers the adverse effects on length…

Artificial Intelligence · Computer Science 2025-07-15 Ermo Hua , Che Jiang , Xingtai Lv , Kaiyan Zhang , Youbang Sun , Yuchen Fan , Xuekai Zhu , Biqing Qi , Ning Ding , Bowen Zhou

Positional encodings are a core part of transformer-based models, enabling processing of sequential data without recurrence. This paper presents a theoretical framework to analyze how various positional encoding methods, including…

Machine Learning · Computer Science 2025-06-10 Yin Li

Chain of thought is a natural inference-time method for increasing the computational power of transformer-based large language models (LLMs), but comes at the cost of sequential decoding. Are there more efficient alternatives to expand a…

Machine Learning · Computer Science 2025-11-07 William Merrill , Ashish Sabharwal

Positional encoding is essential for large language models (LLMs) to represent sequence order, yet recent studies show that Rotary Position Embedding (RoPE) can induce massive activation. We investigate the source of these instabilities via…

Computation and Language · Computer Science 2026-01-07 Jing Xiong , Liyang Fan , Hui Shen , Zunhai Su , Min Yang , Lingpeng Kong , Ngai Wong