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Algorithms for listing the subgraphs satisfying a given property (e.g.,being a clique, a cut, a cycle, etc.) fall within the general framework of set systems. A set system (U, F) uses a ground set U (e.g., the network nodes) and an…

Discrete Mathematics · Computer Science 2018-03-13 Alessio Conte , Roberto Grossi , Andrea Marino , Luca Versari

We study the widely used hierarchical agglomerative clustering (HAC) algorithm on edge-weighted graphs. We define an algorithmic framework for hierarchical agglomerative graph clustering that provides the first efficient $\tilde{O}(m)$ time…

Data Structures and Algorithms · Computer Science 2021-06-11 Laxman Dhulipala , David Eisenstat , Jakub Łącki , Vahab Mirrokni , Jessica Shi

Many hard graph problems, such as Hamiltonian Cycle, become FPT when parameterized by treewidth, a parameter that is bounded only on sparse graphs. When parameterized by the more general parameter clique-width, Hamiltonian Cycle becomes…

Data Structures and Algorithms · Computer Science 2014-11-24 Sigve Hortemo Sæther

We consider the maintenance of maximal bicliques from a dynamic bipartite graph that changes over time due to the addition or deletion of edges. When the set of edges in a graph changes, we are interested in knowing the change in the set of…

Data Structures and Algorithms · Computer Science 2017-07-27 Apurba Das , Srikanta Tirthapura

Let $\mbox{interval} + k v$, $\mbox{interval} + k e$, and $\mbox{interval} - k e$ denote the classes of graphs that can be obtained from some interval graph by adding $k$ vertices, adding $k$ edges, and deleting $k$ edges, respectively.…

Discrete Mathematics · Computer Science 2014-10-10 Yixin Cao

Listing dense subgraphs in large graphs plays a key task in varieties of network analysis applications like community detection. Clique, as the densest model, has been widely investigated. However, in practice, communities rarely form as…

Data Structures and Algorithms · Computer Science 2022-02-22 Zhengren Wang , Yi Zhou , Mingyu Xiao , Bakhadyr Khoussainov

We consider the problem of counting all $k$-vertex subgraphs in an input graph, for any constant $k$. This problem (denoted sub-cnt$_k$) has been studied extensively in both theory and practice. In a classic result, Chiba and Nishizeki…

Data Structures and Algorithms · Computer Science 2019-12-02 Suman K. Bera , Noujan Pashanasangi , C. Seshadhri

The problem of listing the $K$ shortest simple (loopless) $st$-paths in a graph has been studied since the early 1960s. For a non-negatively weighted graph with $n$ vertices and $m$ edges, the most efficient solution is an $O(K(mn + n^2…

Data Structures and Algorithms · Computer Science 2014-11-26 Romeo Rizzi , Gustavo Sacomoto , Marie-France Sagot

Statistical analysis of large and sparse graphs is a challenging problem in data science due to the high dimensionality and nonlinearity of the problem. This paper presents a fast and scalable algorithm for partitioning such graphs into…

Data Structures and Algorithms · Computer Science 2018-12-24 Hannu Reittu , Lasse Leskelä , Tomi Räty , Marco Fiorucci

We study deterministic algorithms for computing graph cuts, with focus on two fundamental problems: balanced sparse cut and $k$-vertex connectivity for small $k$ ($k=O(\polylog n)$). Both problems can be solved in near-linear time with…

Data Structures and Algorithms · Computer Science 2019-10-21 Yu Gao , Jason Li , Danupon Nanongkai , Richard Peng , Thatchaphol Saranurak , Sorrachai Yingchareonthawornchai

Constructing a sparse spanning subgraph is a fundamental primitive in graph theory. In this paper, we study this problem in the Centralized Local model, where the goal is to decide whether an edge is part of the spanning subgraph by…

Data Structures and Algorithms · Computer Science 2017-07-20 Christoph Lenzen , Reut Levi

We develop a sparse graph regularity method that applies to graphs with few 4-cycles, including new counting and removal lemmas for 5-cycles in such graphs. Some applications include: * Every $n$-vertex graph with no 5-cycle can be made…

Combinatorics · Mathematics 2021-09-28 David Conlon , Jacob Fox , Benny Sudakov , Yufei Zhao

We consider the problem of enumerating all instances of a given pattern graph in a large data graph. Our focus is on determining the input/output (I/O) complexity of this problem. Let $E$ be the number of edges in the data graph, $k=O(1)$…

Data Structures and Algorithms · Computer Science 2015-11-13 Francesco Silvestri

The state-of-the-art modern pose-graph optimization (PGO) systems are vertex based. In this context the number of variables might be high, albeit the number of cycles in the graph (loop closures) is relatively low. For sparse problems…

Robotics · Computer Science 2022-03-30 Fang Bai , Teresa Vidal-Calleja , Giorgio Grisetti

We propose an improved algorithm for counting the number of Hamiltonian cycles in a directed graph. The basic idea of the method is sequential acceptance/rejection, which is successfully used in approximating the number of perfect matchings…

Data Structures and Algorithms · Computer Science 2009-11-23 Jinshan Zhang

In this paper, we present enumeration algorithms to list all preferred extensions of an argumentation framework. This task is equivalent to enumerating all maximal semikernels of a directed graph. For directed graphs on $n$ vertices, all…

Data Structures and Algorithms · Computer Science 2019-07-03 Serge Gaspers , Ray Li

We study the problem of counting all cycles or self-avoiding walks (SAWs) on triangulated planar graphs. We present a subexponential $2^{O(\sqrt{n})}$ time algorithm for this counting problem. Among the technical ingredients used in this…

Data Structures and Algorithms · Computer Science 2022-08-23 Jin-Yi Cai , Ashwin Maran

2-joins are edge cutsets that naturally appear in the decomposition of several classes of graphs closed under taking induced subgraphs, such as balanced bipartite graphs, even-hole-free graphs, perfect graphs and claw-free graphs. Their…

Data Structures and Algorithms · Computer Science 2016-08-14 Pierre Charbit , Michel Habib , Nicolas Trotignon , Kristina Vušković

Circuit analysis of any certain model behavior is a central task in mechanistic interpretability. We introduce our circuit discovery pipeline with Sparse Autoencoders (SAEs) and a variant called Transcoders. With these two modules inserted…

Machine Learning · Computer Science 2024-07-23 Xuyang Ge , Fukang Zhu , Wentao Shu , Junxuan Wang , Zhengfu He , Xipeng Qiu

In this work, we give a unifying view of locality in four settings: distributed algorithms, sequential greedy algorithms, dynamic algorithms, and online algorithms. We introduce a new model of computing, called the online-LOCAL model: the…

Data Structures and Algorithms · Computer Science 2022-11-15 Amirreza Akbari , Navid Eslami , Henrik Lievonen , Darya Melnyk , Joona Särkijärvi , Jukka Suomela