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Tree-based networks are a class of phylogenetic networks that attempt to formally capture what is meant by "tree-like" evolution. A given non-tree-based phylogenetic network, however, might appear to be very close to being tree-based, or…

Populations and Evolution · Quantitative Biology 2020-01-17 Mareike Fischer , Andrew Francis

A sequence of real numbers (x_n) is Benford if the significands, i.e. the fraction parts in the floating-point representation of (x_n) are distributed logarithmically. Similarly, a discrete-time irreducible and aperiodic finite-state Markov…

Probability · Mathematics 2010-03-05 Bahar Kaynar , Arno Berger , Theodore P. Hill , Ad Ridder

A Markov Additive Process is a bi-variate Markov process $(\xi,J)=\big((\xi_t,J_t),t\geq0\big)$ which should be thought of as a multi-type L\'evy process: the second component $J$ is a Markov chain on a finite space $\{1,\ldots,K\}$, and…

Probability · Mathematics 2018-10-04 Robin Stephenson

Given a finite typed rooted tree $T$ with $n$ vertices, the {\em empirical subtree measure} is the uniform measure on the $n$ typed subtrees of $T$ formed by taking all descendants of a single vertex. We prove a large deviation principle in…

Probability · Mathematics 2007-05-23 Amir Dembo , Peter Morters , Scott Sheffield

We investigate recurrence and transience of Branching Markov Chains (BMC) in discrete time. Branching Markov Chains are clouds of particles which move (according to an irreducible underlying Markov Chain) and produce offspring…

Probability · Mathematics 2016-09-07 Nina Gantert , Sebastian Mueller

Stochastic optimization methods such as mirror descent have wide applications due to low computational cost. Those methods have been well studied under assumption of the independent and identical distribution, and usually achieve sublinear…

Machine Learning · Computer Science 2023-09-27 Yawei Zhao

Topological behavior, such as chaos, irreducibility, and mixing of a one-sided shift of finite type, is well elucidated. Meanwhile, the investigation of multidimensional shifts, for instance, textile systems is difficult and only a few…

Dynamical Systems · Mathematics 2015-09-10 Jung-Chao Ban , Chih-Hung Chang

R\'emy's algorithm is a Markov chain that iteratively generates a sequence of random trees in such a way that the $n^{\mathrm{th}}$ tree is uniformly distributed over the set of rooted, planar, binary trees with $2n+1$ vertices. We obtain a…

Probability · Mathematics 2020-03-05 Steven N. Evans , Rudolf Grübel , Anton Wakolbinger

In~\cite{fgs}, the class of Poisson representable processes was introduced. Several well-known processes were shown not to belong to this class, with examples including both the Curie Weiss model and the Ising model on $ \mathbb{Z}^2 $ for…

Probability · Mathematics 2025-01-27 Malin Palö Forsström

We study the recurrence/transience phase transition for Markov chains on $\mathbb{R}_+$, $\mathbb{R}$, and $\mathbb{R}^2$ whose increments have heavy tails with exponent in $(1,2)$ and asymptotically zero mean. This is the infinite-variance…

Probability · Mathematics 2019-06-24 Nicholas Georgiou , Mikhail V. Menshikov , Dimitri Petritis , Andrew R. Wade

The extremes of a univariate Markov chain with regulary varying stationary marginal distribution and asymptotically linear behavior are known to exhibit a multiplicative random walk structure called the tail chain. In this paper, we extend…

Probability · Mathematics 2014-02-04 Anja Janßen , Johan Segers

We consider the random Markov matrix obtained by assigning i.i.d. non-negative weights to each edge of the complete oriented graph. In this study, the weights have unbounded first moment and belong to the domain of attraction of an…

Spectral Theory · Mathematics 2017-06-30 Charles Bordenave , Pietro Caputo , Djalil Chafaï , Daniele Piras

We introduce a general algorithm for the computation of the scale functions of a spectrally negative L\'evy process $X$, based on a natural weak approximation of $X$ via upwards skip-free continuous-time Markov chains with stationary…

Probability · Mathematics 2015-04-21 Aleksandar Mijatović , Matija Vidmar , Saul Jacka

We study (plane) tree-valued Markov chains $(T_n,n \geq 1)$ with uniform backward dynamics and show that they can be obtained by sampling from a real tree. As non--plane trees, every such Markov chain is represented by a weighted real tree.…

Probability · Mathematics 2026-03-17 David Geldbach

We analyze an evolving network model of Krapivsky and Redner in which new nodes arrive sequentially, each connecting to a previously existing node b with probability proportional to the p-th power of the in-degree of b. We restrict to the…

Probability · Mathematics 2007-05-23 Roberto Oliveira , Joel Spencer

In this work, we characterise the statistics of Markov chains by constructing an associated sequence of periodic differential operators. Studying the density of states of these operators reveals the absolutely continuous invariant measure…

Dynamical Systems · Mathematics 2025-09-22 Bryn Davies , Angelica Yu Xiao

We introduce an algorithm for generating a random sequence of fragmentation trees, which we call the ancestral branching algorithm. This algorithm builds on the recursive partitioning structure of a tree and gives rise to an associated…

Probability · Mathematics 2011-11-02 Harry Crane

A standard way of justifying that a certain probabilistic property holds in a system is to provide a witnessing subsystem (also called critical subsystem) for the property. Computing minimal witnessing subsystems is NP-hard already for…

Logic in Computer Science · Computer Science 2021-09-20 Simon Jantsch , Jakob Piribauer , Christel Baier

In this paper, we propose to study a general notion of a down-up Markov chain for multifurcating trees with n labelled leaves. We study in detail down-up chains associated with the $(\alpha, \gamma)$-model of Chen et al. (2009),…

Probability · Mathematics 2020-09-23 Frederik Sørensen

Recent work has proven the existence of extreme inbreeding in a European ancestry sample taken from the contemporary UK population \cite{nature_01}. This result brings our attention again to a math problem related to inbreeding family trees…

Populations and Evolution · Quantitative Biology 2021-09-08 C. Jarne , F A. Gómez Albarracín , M. Caruso