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Personalized PageRank (PPR) is a traditional measure for node proximity on large graphs. For a pair of nodes $s$ and $t$, the PPR value $\pi_s(t)$ equals the probability that an $\alpha$-discounted random walk from $s$ terminates at $t$ and…

Data Structures and Algorithms · Computer Science 2024-03-21 Mingji Yang , Hanzhi Wang , Zhewei Wei , Sibo Wang , Ji-Rong Wen

It has been observed that message-passing graph neural networks (GNN) sometimes struggle to maintain a healthy balance between the efficient/scalable modeling of long-range dependencies across nodes while avoiding unintended consequences…

Machine Learning · Computer Science 2025-05-21 Yongyi Yang , Tang Liu , Yangkun Wang , Zengfeng Huang , David Wipf

Graph Neural Networks (GNNs) have achieved remarkable success in learning node representations and have shown strong performance in tasks such as node classification. However, recent findings indicate that the presence of noise in…

Machine Learning · Computer Science 2025-07-01 Yancheng Wang , Yingzhen Yang

Graph Neural Networks (GNNs) are widely applied to graph learning problems such as node classification. When scaling up the underlying graphs of GNNs to a larger size, we are forced to either train on the complete graph and keep the full…

Machine Learning · Computer Science 2024-06-25 Mucong Ding , Tahseen Rabbani , Bang An , Evan Z Wang , Furong Huang

Graphs are central to modeling complex systems in domains such as social networks, molecular chemistry, and neuroscience. While Graph Neural Networks, particularly Graph Convolutional Networks, have become standard tools for graph learning,…

Machine Learning · Computer Science 2025-11-03 Angelica Liguori , Ettore Ritacco , Pietro Sabatino , Annalisa Socievole

Graph Neural Networks (GNNs) have made significant advances on several fundamental inference tasks. As a result, there is a surge of interest in using these models for making potentially important decisions in high-regret applications.…

Machine Learning · Computer Science 2020-02-26 Kaidi Xu , Sijia Liu , Pin-Yu Chen , Mengshu Sun , Caiwen Ding , Bhavya Kailkhura , Xue Lin

Graph neural networks (GNNs) have attracted much attention because of their excellent performance on tasks such as node classification. However, there is inadequate understanding on how and why GNNs work, especially for node representation…

Machine Learning · Computer Science 2020-06-09 Guoji Fu , Yifan Hou , Jian Zhang , Kaili Ma , Barakeel Fanseu Kamhoua , James Cheng

Graph neural networks (GNNs), which have emerged as an effective method for handling machine learning tasks on graphs, bring a new approach to building recommender systems, where the task of recommendation can be formulated as the link…

Information Retrieval · Computer Science 2022-11-03 Yuwei Hu , Jiajie Li , Zhongming Yu , Zhiru Zhang

Recently, the study of graph neural network (GNN) has attracted much attention and achieved promising performance in molecular property prediction. Most GNNs for molecular property prediction are proposed based on the idea of learning the…

Machine Learning · Computer Science 2021-04-15 Yingfang Yuan , Wenjun Wang , Wei Pang

Network representation learning (NRL) is a powerful technique for learning low-dimensional vector representation of high-dimensional and sparse graphs. Most studies explore the structure and metadata associated with the graph using random…

Machine Learning · Computer Science 2020-01-30 Zekarias T. Kefato , Sarunas Girdzijauskas

Representation learning over graph structure data has been widely studied due to its wide application prospects. However, previous methods mainly focus on static graphs while many real-world graphs evolve over time. Modeling such evolution…

Machine Learning · Statistics 2020-09-02 Tijin Yan , Hongwei Zhang , Zirui Li , Yuanqing Xia

Recent advances in data processing have stimulated the demand for learning graphs of very large scales. Graph Neural Networks (GNNs), being an emerging and powerful approach in solving graph learning tasks, are known to be difficult to…

Machine Learning · Computer Science 2023-06-02 Ningyi Liao , Dingheng Mo , Siqiang Luo , Xiang Li , Pengcheng Yin

Graph neural networks (GNNs) have drawn increasing attention in recent years and achieved remarkable performance in many graph-based tasks, especially in semi-supervised learning on graphs. However, most existing GNNs are based on the…

Machine Learning · Computer Science 2024-01-24 Li Zhou , Wenyu Chen , Dingyi Zeng , Shaohuan Cheng , Wanlong Liu , Malu Zhang , Hong Qu

Graph Data Prompt (GDP), which introduces specific prompts in graph data for efficiently adapting pre-trained GNNs, has become a mainstream approach to graph fine-tuning learning problem. However, existing GDPs have been respectively…

Machine Learning · Computer Science 2026-04-14 Beibei Wang , Bo Jiang , Ziyan Zhang , Jin Tang

Graph neural networks (GNNs) have emerged as a powerful tool for graph classification and representation learning. However, GNNs tend to suffer from over-smoothing problems and are vulnerable to graph perturbations. To address these…

Machine Learning · Computer Science 2021-11-01 Yuzhou Chen , Baris Coskunuzer , Yulia R. Gel

Over the past two decades, there has been a tremendous increase in the growth of representation learning methods for graphs, with numerous applications across various fields, including bioinformatics, chemistry, and the social sciences.…

Machine Learning · Computer Science 2023-12-21 Abdulkadir Celikkanat , Nikolaos Nakis , Morten Mørup

Graph Convolutional Networks (GCNs) are a popular method from graph representation learning that have proved effective for tasks like node classification tasks. Although typical GCN models focus on classifying nodes within a static graph,…

Machine Learning · Computer Science 2021-10-13 Yucai Fan , Yuhang Yao , Carlee Joe-Wong

Graph convolution networks (GCNs) are currently mainstream in learning with irregular data. These models rely on message passing and attention mechanisms that capture context and node-to-node relationships. With multi-head attention, GCNs…

Machine Learning · Computer Science 2022-03-28 Hichem Sahbi

Graphs arise naturally in many real-world applications including social networks, recommender systems, ontologies, biology, and computational finance. Traditionally, machine learning models for graphs have been mostly designed for static…

Machine Learning · Computer Science 2020-04-28 Seyed Mehran Kazemi , Rishab Goel , Kshitij Jain , Ivan Kobyzev , Akshay Sethi , Peter Forsyth , Pascal Poupart

Recent deep learning models have moved beyond low-dimensional regular grids such as image, video, and speech, to high-dimensional graph-structured data, such as social networks, brain connections, and knowledge graphs. This evolution has…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-10-22 Lingxiao Ma , Zhi Yang , Youshan Miao , Jilong Xue , Ming Wu , Lidong Zhou , Yafei Dai