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Annotation of medical images, such as MRI and CT scans, is crucial for evaluating treatment efficacy and planning radiotherapy. However, the extensive workload of medical professionals limits their ability to annotate large image datasets,…

Image and Video Processing · Electrical Eng. & Systems 2025-03-03 Eichi Takaya , Shinnosuke Yamamoto

Semantic segmentation of medical images is pivotal in applications like disease diagnosis and treatment planning. While deep learning has excelled in automating this task, a major hurdle is the need for numerous annotated segmentation…

Image and Video Processing · Electrical Eng. & Systems 2024-09-02 Li Zhang , Basu Jindal , Ahmed Alaa , Robert Weinreb , David Wilson , Eran Segal , James Zou , Pengtao Xie

Cardiac magnetic resonance imaging improves on diagnosis of cardiovascular diseases by providing images at high spatiotemporal resolution. Manual evaluation of these time-series, however, is expensive and prone to biased and…

Computer Vision and Pattern Recognition · Computer Science 2018-04-06 Fabian Isensee , Paul Jaeger , Peter M. Full , Ivo Wolf , Sandy Engelhardt , Klaus H. Maier-Hein

Gaussian Process (GPs) models are a rich distribution over functions with inductive biases controlled by a kernel function. Learning occurs through the optimisation of kernel hyperparameters using the marginal likelihood as the objective.…

Machine Learning · Statistics 2021-11-22 Fergus Simpson , Vidhi Lalchand , Carl Edward Rasmussen

In this work, we present a fully automatic method to segment cardiac structures from late-gadolinium enhanced (LGE) images without using labelled LGE data for training, but instead by transferring the anatomical knowledge and features…

Image and Video Processing · Electrical Eng. & Systems 2020-02-06 Chen Chen , Cheng Ouyang , Giacomo Tarroni , Jo Schlemper , Huaqi Qiu , Wenjia Bai , Daniel Rueckert

Automated and semi-automated techniques in biomedical electron microscopy (EM) enable the acquisition of large datasets at a high rate. Segmentation methods are therefore essential to analyze and interpret these large volumes of data, which…

Computer Vision and Pattern Recognition · Computer Science 2023-08-08 Anusha Aswath , Ahmad Alsahaf , Ben N. G. Giepmans , George Azzopardi

Angiography is widely used to detect, diagnose, and treat cerebrovascular diseases. While numerous techniques have been proposed to segment the vascular network from different imaging modalities, deep learning (DL) has emerged as a…

Image and Video Processing · Electrical Eng. & Systems 2023-08-29 Mumu Aktar , Hassan Rivaz , Marta Kersten-Oertel , Yiming Xiao

The goal of this project is to use magnetic resonance imaging (MRI) data to provide an end-to-end analytics pipeline for left and right ventricle (LV and RV) segmentation. Another aim of the project is to find a model that would be…

Image and Video Processing · Electrical Eng. & Systems 2019-09-19 Bosung Seo , Daniel Mariano , John Beckfield , Vinay Madenur , Yuming Hu , Tony Reina , Marcus Bobar , Mai H. Nguyen , Ilkay Altintas

Brain-Computer Interfaces (BCI) based on Electroencephalography (EEG) signals, in particular motor imagery (MI) data have received a lot of attention and show the potential towards the design of key technologies both in healthcare and other…

Signal Processing · Electrical Eng. & Systems 2021-04-27 Sion An , Soopil Kim , Philip Chikontwe , Sang Hyun Park

Few-Shot Medical Image Segmentation (FSMIS) has been widely used to train a model that can perform segmentation from only a few annotated images. However, most existing prototype-based FSMIS methods generate multiple prototypes from the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-29 Jianchao Jiang , Haofeng Zhang

Segmentation of ultrasound images is an essential task in both diagnosis and image-guided interventions given the ease-of-use and low cost of this imaging modality. As manual segmentation is tedious and time consuming, a growing body of…

Image and Video Processing · Electrical Eng. & Systems 2020-01-22 Bahareh Behboodi , Hassan Rivaz

The lack of large annotated datasets in medical imaging is an intrinsic burden for supervised Deep Learning (DL) segmentation models. Few-shot learning approaches are cost-effective solutions to transfer pre-trained models using only…

Image and Video Processing · Electrical Eng. & Systems 2024-09-05 Ali Keshavarzi , Elsa Angelini

Computational modeling of cardiovascular function has become a critical part of diagnosing, treating and understanding cardiovascular disease. Most strategies involve constructing anatomically accurate computer models of cardiovascular…

Image and Video Processing · Electrical Eng. & Systems 2025-01-28 Numi Sveinsson Cepero , Shawn C. Shadden

We introduce a novel method for discerning optical telescope images of stars from those of galaxies using Gaussian processes (GPs). Although applications of GPs often struggle in high-dimensional data modalities such as optical image…

Instrumentation and Methods for Astrophysics · Physics 2022-03-14 Amanda L. Muyskens , Imène R. Goumiri , Benjamin W. Priest , Michael D. Schneider , Robert E. Armstrong , Jason M. Bernstein , Ryan Dana

Gaussian processes (GPs) are non-parametric, flexible, models that work well in many tasks. Combining GPs with deep learning methods via deep kernel learning (DKL) is especially compelling due to the strong representational power induced by…

Machine Learning · Computer Science 2021-07-14 Idan Achituve , Aviv Navon , Yochai Yemini , Gal Chechik , Ethan Fetaya

Motivated by the need to study the molecular mechanism underlying Type 1 Diabetes (T1D) with the gene expression data collected from both the patients and healthy controls at multiple time points, we propose an innovative method for jointly…

Methodology · Statistics 2018-12-10 Bochao Jia , Faming Liang , the TEDDY Study Group

Automatic segmentation of the heart cavity is an essential task for the diagnosis of cardiac diseases. In this paper, we propose a semi-supervised segmentation setup for leveraging unlabeled data to segment Left-ventricle, Right-ventricle,…

Image and Video Processing · Electrical Eng. & Systems 2023-02-23 Mahyar Bolhassani , Ilkay Oksuz

Image translation across domains for unpaired datasets has gained interest and great improvement lately. In medical imaging, there are multiple imaging modalities, with very different characteristics. Our goal is to use cross-modality…

Image and Video Processing · Electrical Eng. & Systems 2022-02-07 Leo Segre , Or Hirschorn , Dvir Ginzburg , Dan Raviv

Current deep learning based segmentation models often generalize poorly between domains due to insufficient training data. In real-world clinical applications, cross-domain image analysis tools are in high demand since medical images from…

Image and Video Processing · Electrical Eng. & Systems 2020-07-15 Yingying Zhu , Youbao Tang , Yuxing Tang , Daniel C. Elton , Sungwon Lee , Perry J. Pickhardt , Ronald M. Summers

The heart's electrical activity, recorded through Electrocardiography (ECG), is essential for diagnosing various cardiovascular conditions. However, many existing ECG segmentation models rely on complex, multi-layered architectures such as…

Machine Learning · Computer Science 2025-08-25 Muhammad Fathur Rohman Sidiq , Abdurrouf , Didik Rahadi Santoso