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Empirical data plays an important role in evolutionary computation research. To make better use of the available data, ontologies have been proposed in the literature to organize their storage in a structured way. However, the full…

Neural and Evolutionary Computing · Computer Science 2023-01-25 Ana Kostovska , Diederick Vermetten , Sašo Džeroski , Panče Panov , Tome Eftimov , Carola Doerr

For decades, researchers in information visualisation and graph drawing have focused on developing techniques for the layout and display of very large and complex networks. Experiments involving human participants have also explored the…

Human-Computer Interaction · Computer Science 2018-09-05 Vahan Yoghourdjian , Daniel Archambault , Stephan Diehl , Tim Dwyer , Karsten Klein , Helen C. Purchase , Hsiang-Yun Wu

Leveraging generative Artificial Intelligence (AI), we have transformed a dataset comprising 1,000 scientific papers into an ontological knowledge graph. Through an in-depth structural analysis, we have calculated node degrees, identified…

Machine Learning · Computer Science 2024-06-12 Markus J. Buehler

Enterprises are creating domain-specific knowledge graphs by curating and integrating their business data from multiple sources. The data in these knowledge graphs can be described using ontologies, which provide a semantic abstraction to…

Databases · Computer Science 2020-10-06 Chuan Lei , Rana Alotaibi , Abdul Quamar , Vasilis Efthymiou , Fatma Özcan

Deep generative models have recently achieved significant success in modeling graph data, including dynamic graphs, where topology and features evolve over time. However, unlike in vision and natural language domains, evaluating generative…

Machine Learning · Computer Science 2025-03-04 Ryien Hosseini , Filippo Simini , Venkatram Vishwanath , Rebecca Willett , Henry Hoffmann

In recent years, large language models (LLMs) have emerged as promising candidates for graph tasks. Many studies leverage natural language to describe graphs and apply LLMs for reasoning, yet most focus narrowly on performance benchmarks…

Machine Learning · Computer Science 2026-01-28 Yuxiang Wang , Xinnan Dai , Wenqi Fan , Yao Ma

Recent work on interpretability has focused on concept-based explanations, where deep learning models are explained in terms of high-level units of information, referred to as concepts. Concept learning models, however, have been shown to…

Machine Learning · Computer Science 2023-10-02 Mateo Espinosa Zarlenga , Pietro Barbiero , Zohreh Shams , Dmitry Kazhdan , Umang Bhatt , Adrian Weller , Mateja Jamnik

Reviewing scientific literature is a cumbersome, time consuming but crucial activity in research. Leveraging a scholarly knowledge graph, we present a methodology and a system for comparing scholarly literature, in particular research…

Digital Libraries · Computer Science 2020-12-02 A. Oelen , M. Y. Jaradeh , M. Stocker , S. Auer

Knowledge Graph (KG) completion research usually focuses on densely connected benchmark datasets that are not representative of real KGs. We curate two KG datasets that include biomedical and encyclopedic knowledge and use an existing…

Machine Learning · Computer Science 2021-06-15 Justin Lovelace , Denis Newman-Griffis , Shikhar Vashishth , Jill Fain Lehman , Carolyn Penstein Rosé

Since long, corporations are looking for knowledge sources which can provide structured description of data and can focus on meaning and shared understanding. Structures which can facilitate open world assumptions and can be flexible enough…

Artificial Intelligence · Computer Science 2014-03-31 Iti Mathur , Nisheeth Joshi , Hemant Darbari , Ajai Kumar

We introduce an approach to discovery informatics that uses so called knowledge graphs as the essential representation structure. Knowledge graph is an umbrella term that subsumes various approaches to tractable representation of large…

Artificial Intelligence · Computer Science 2015-04-29 Vit Novacek

In many domains where data are represented as graphs, learning a similarity metric among graphs is considered a key problem, which can further facilitate various learning tasks, such as classification, clustering, and similarity search.…

Machine Learning · Computer Science 2020-10-06 Guixiang Ma , Nesreen K. Ahmed , Theodore L. Willke , Philip S. Yu

Understanding dataset complexity is fundamental to evaluating and comparing link prediction models on knowledge graphs (KGs). While the Cumulative Spectral Gradient (CSG) metric, derived from probabilistic divergence between classes within…

Machine Learning · Computer Science 2025-08-22 Haji Gul , Abul Ghani Naim , Ajaz Ahmad Bhat

Knowledge-intensive tasks pose a significant challenge for Machine Learning (ML) techniques. Commonly adopted methods, such as Large Language Models (LLMs), often exhibit limitations when applied to such tasks. Nevertheless, there have been…

Machine Learning · Computer Science 2024-05-20 Albert Sawczyn , Jakub Binkowski , Piotr Bielak , Tomasz Kajdanowicz

Graph learning plays a vital role in mining and analyzing complex relationships within graph data and has been widely applied to real-world scenarios such as social, citation, and e-commerce networks. Foundation models in computer vision…

Machine Learning · Computer Science 2025-11-19 Haihong Zhao , Zhixun Li , Chenyi Zi , Aochuan Chen , Fugee Tsung , Jia Li , Jeffrey Xu Yu

While machine learning on graphs has demonstrated promise in drug design and molecular property prediction, significant benchmarking challenges hinder its further progress and relevance. Current benchmarking practices often lack focus on…

In the quest of accurate vertex classification, we introduce GRAVITY (Graph-based Representation leArning via Vertices Interaction TopologY), a framework inspired by physical systems where objects self-organize under attractive forces.…

Machine Learning · Computer Science 2025-08-13 Etienne Gael Tajeuna , Jean Marie Tshimula

Processing large complex networks recently attracted considerable interest. Complex graphs are useful in a wide range of applications from technological networks to biological systems like the human brain. Sometimes these networks are…

Data Structures and Algorithms · Computer Science 2019-12-03 Christian Schulz

Graphs may be used to represent many different problem domains -- a concrete example is that of detecting communities in social networks, which are represented as graphs. With big data and more sophisticated applications becoming widespread…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-03 Miguel E. Coimbra , Alexandre P. Francisco , Luis Veiga

In statistical relational learning, knowledge graph completion deals with automatically understanding the structure of large knowledge graphs---labeled directed graphs---and predicting missing relationships---labeled edges. State-of-the-art…

Artificial Intelligence · Computer Science 2017-11-28 Théo Trouillon , Christopher R. Dance , Johannes Welbl , Sebastian Riedel , Éric Gaussier , Guillaume Bouchard
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