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We present a Hamiltonian approach for the wellknown Eigen model of the Darwin selection dynamics. Hamiltonization is carried out by means of the embedding of the population variable space, describing behavior of the system, into the space…

Biological Physics · Physics 2009-10-30 A. V. Shapovalov , E. V. Evdokimov

The long time dynamics of polymeric materials has been extensively studied in the past through various experimental techniques and computer simulations. While computer simulations typically treat generic, simplified models, experiments deal…

Soft Condensed Matter · Physics 2008-09-10 Vagelis A. Harmandaris , Kurt Kremer

We introduce notions of vector field and its (discrete time) flow on a chain complex. The resulting dynamical systems theory provides a set of tools with a broad range of applicability that allow, among others, to replace in a canonical way…

Commutative Algebra · Mathematics 2019-09-19 Alexandre Tchernev

We consider model order reduction of parameterized Hamiltonian systems describing nondissipative phenomena, like wave-type and transport dominated problems. The development of reduced basis methods for such models is challenged by two main…

Numerical Analysis · Mathematics 2021-05-27 Cecilia Pagliantini

Nonequilibrium statistical mechanics exhibit a variety of complex phenomena far from equilibrium. It inherits challenges of equilibrium, including accurately describing the joint distribution of a large number of configurations, and also…

Statistical Mechanics · Physics 2024-02-08 Ying Tang , Jing Liu , Jiang Zhang , Pan Zhang

We present the general properties of dynamic dissipative fluid distribution endowed with hyperbolical symmetry. All the equations required for its analysis are exhibited and used to contrast the behavior of the system with the spherically…

General Relativity and Quantum Cosmology · Physics 2022-10-05 L. Herrera

Differential equations are a ubiquitous tool to study dynamics, ranging from physical systems to complex systems, where a large number of agents interact through a graph with non-trivial topological features. Data-driven approximations of…

Statistical Mechanics · Physics 2024-04-26 Vaiva Vasiliauskaite , Nino Antulov-Fantulin

Spin-glasses are universal models that can capture complex behavior of many-body systems at the interface of statistical physics and computer science including discrete optimization, inference in graphical models, and automated reasoning.…

Machine Learning · Computer Science 2020-01-14 Gavin S. Hartnett , Masoud Mohseni

An n-dimensional analogue of the Klein bottle arose in our study of topological complexity of planar polygon spaces. We determine its integral cohomology algebra and stable homotopy type, and give an explicit immersion and embedding in…

Algebraic Topology · Mathematics 2017-06-20 Donald M. Davis

These lecture notes can be read in two ways. The first two Sections contain a review of the phenomenology of several physical systems with slow nonequilibrium dynamics. In the Conclusions we summarize the scenario derived from the solution…

Condensed Matter · Physics 2007-05-23 Leticia F. Cugliandolo

Complex systems span multiple spatial and temporal scales, making their dynamics challenging to understand and predict. This challenge is especially daunting when one wants to study localized and/or rare events. Advances in dynamical…

Atmospheric and Oceanic Physics · Physics 2025-09-22 Chenyu Dong , Gabriele Messori , Davide Faranda , Adriano Gualandi , Valerio Lucarini , Gianmarco Mengaldo

We address a fundamental mismatch between the combinations of dynamics that occur in cyber-physical systems and the limited kinds of dynamics supported in analysis. Modern applications combine communication, computation, and control. They…

Logic in Computer Science · Computer Science 2016-12-02 Andre Platzer

We consider the basic features of complex dynamic and control systems, including systems having hierarchical structure. Special attention is paid to the problems of design and synthesis of complex systems and control models, and to the…

Computational Engineering, Finance, and Science · Computer Science 2008-12-25 Armen Bagdasaryan

The aim of this paper is to share with the mathematical community a list of 33 problems that I have found along the years during my research. I believe that it is worth to think about them and, hopefully, it will be possible either to solve…

Dynamical Systems · Mathematics 2020-12-07 Armengol Gasull

The coarsening process in a class of driven systems is studied. These systems have previously been shown to exhibit phase separation and slow coarsening in one dimension. We consider generalizations of this class of models to higher…

Statistical Mechanics · Physics 2015-06-24 Y. Kafri , D. Biron , M. R. Evans , D. Mukamel

As metabolomics datasets are becoming larger and more complex, there is an increasing need for model-based data integration and analysis to optimally leverage these data. Dynamical models of metabolism allow for the integration of…

Quantitative Methods · Quantitative Biology 2023-11-29 Polina Lakrisenko , Daniel Weindl

Open problems in fluid dynamics, such as the existence of finite-time singularities (blowup), explanation of intermittency in developed turbulence, etc., are related to multi-scale structure and symmetries of underlying equations of motion.…

Fluid Dynamics · Physics 2021-08-11 Ciro S. Campolina , Alexei A. Mailybaev

Many biological and physical systems exhibit behaviour at multiple spatial, temporal or population scales. Multiscale processes provide challenges when they are to be simulated using numerical techniques. While coarser methods such as…

Quantitative Methods · Quantitative Biology 2018-02-12 Cameron A. Smith , Christian A. Yates

We consider the general model for dynamical systems defined on a simplicial complex. We describe the conjugacy classes of these systems and show how symmetries in a given simplicial complex manifest in the dynamics defined thereon,…

Dynamical Systems · Mathematics 2022-10-05 Eddie Nijholt , Lee DeVille

A categorical framework for modeling and analyzing systems in a broad sense is proposed. These systems should be thought of as `machines' with inputs and outputs, carrying some sort of signal that occurs through some notion of time. Special…

Category Theory · Mathematics 2019-03-18 Patrick Schultz , David I. Spivak , Christina Vasilakopoulou
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